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Mutant Lines
11-6869-1

11-6869-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 29869628 [Map]; Strand: w
- AT1G79410.1 - [+] show detail - organic cation/carnitine transporter5
  Distance: 0; Region: exon1 (5UTR)

GCAACAATGG TGCCAACGAA TCCGCCATGG TTGCTTACTT TGATCGATCT 
TGTTGAGAAT GTGAGAATTA TTACATCAAA ATTAAAAACA AACAACTAGT 
ACTTTTGAAA ATATATAATG TGTGGTCAAG AGATCTGATC TTTGATGATC 
AATGAGAAAA TGTTTTTTTC TTGTTTGTTT TTGTCTTTTT GAACAAACTG 
TTTAAGATTT GTATCTGTGC GGGCCTTTTT GTGTTAAACT ATGACCAATA 
ATAATTGAAG CACAATATAA ATACATAGTT GCTGATGTAA GTACATGCGA 
CATATCAACA TGGACACTTC TGCTTATAAA TTCATACTGG GCCGTTAAGT 
AAAGCCCATT TTAATTGGTT ACTCAAATTG AGAAGTCTAC CGCTCACGTG 
TGGCCCACGA TAAGTACGTT ATGCTTCCAC ATGTTGCAGA GAATTGTGAA 
ACTTGACCAC TCAACTCTTA ACATCTCGCC GATAATTTTT TGTTTTTGTT 
TTTTGTTTTT GTCATAATTC GCCAAGAAAT TATGTTATAT ATAATATAAC 
GAATAAAGAA AGGGGACTAT CAAATTGAAT AGTAAAATAA ATTATTATAA 
GCT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 29869527 [Map]; Strand: w
  - AT1G79410.1 - [+] show detail - organic cation/carnitine transporter5
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-6869-1 - 3-prime edge
```
AAATTGAAAA CGGTAGAGGT ATTTTACCCA CATTGAAGAA GATGANGACA 
CTTCTTCACC TCTGACTGTC GACAAGATCC TCGAGAANAG CT
```

AT1G79410.1

Model type: Protein coding
Short Description: organic cation/carnitine transporter5
Computational Description: organic cation/carnitine transporter5 (5-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 6 (TAIR:AT1G16370.1); Has 11548 Blast hits to 11506 proteins in 1434 species: Archae - 261; Bacteria - 5062; Metazoa - 3508; Fungi - 1334; Plants - 912; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink).
Link: InterPro Scan - TAIR