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Mutant Lines
11-6895-1

11-6895-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 1958332 [Map]; Strand: w
- AT3G06430.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -33; Region: promoter
- AT3G06433.1 - [+] show detail - pseudogene, expressed protein
  Distance: -569; Region: promoter

TTCTGTCACT CTGTTTACGG ATAATTCCCG TCGATACTCA TTTCGGTTGG 
ATATGGTAAA ATACCGGTTT ATATAACCGA ACCGGAAACA CATTTGATCC 
GTTCAAATCC CTTAAAAACC GGATCGTATT TTTAAATATG ATCACATAAT 
TGATCATTTA AAAATAATAC GAGGCTATTT TTTTGGTGTT CAAAAAGATA 
AAAATAATAA TATGAAGCTC GCATCTCTGT AAGTATATAT ATATATAAAA 
CTAAANGGAA AATCACGAAT TATAGTATCA AAAATAGATT TAATAATAAA 
AATAAGGATT GGNGACTGGT GCACAAAAGG NGGTAACAAA CAAACACAAT 
CTTGACTAAA TTCTATAGAA ATATCCCAAA GAAAAAAAAA NCAANNCCAA 
AAAAATNTNG NNTNTNNATT TNNANNANGN CNANGNNNAN GGNCAAANNT 
AACTCTTTNA TNNATGGCTC CCGNGGGAGT TNANTTTNGG GGCANCANTN 
TNTNGTNTAA CTNTNGGGGN ATTGGGNANT TTNTCCGGCC GGAAAGCANA 
NATTNNTGGG GGNGGNNGGC AACGTTAANA ACATGGNNAT CATCTATCTT 
TTTTAACNAA AANAAGCCCT NTNTTTTTTT GGGGCNCNCN CTNTTTNGGG 
GNAATTTTTN NAAAAGNAAC CTTTNANAGG GGTTNNGAN

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 1958258 [Map]; Strand: w
  - AT3G06430.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT3G06433.1 - [+] show detail - pseudogene, expressed protein
    Distance: -643; Region: promoter
Flanking Genome Sequence: 11-6895-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTG 
AGGTGTGAAG GAAGAAGACG ATGGCAGTCA ATGTCTCTCT CCTTTTCTTC 
TTCGCTATGT TCATCCAGAA TCCCCGAAGG TAAGCGTAGG TTTCGTCACA 
GAGATGTGGG CATCGTTAGA TGCGTTTTGG CTGCTTCGAA ATCTTCTCCG 
GGAAGTGTTA CNGAAGAAGA GGCTTTGGAA AGACGGCGAA TT
```

AT3G06430.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Phenotypes

Morphological phenotypes

Determination of insertion point(s)

AT3G06430.1

AT3G06433.1