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11-6918-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1251162 [Map]; Strand: w
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -2387; Region: intergenic
      • AT1G04580.1 - [+] show detail - aldehyde oxidase 4
        Distance: 960; Region: intergenic
    Flanking Genome Sequence: 11-6918-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCGAA AACTAAAGGT CAATTTGTCC TAAATGAAAC
    AAAGTGATAA CAGACAAGAA AACCGCAAAT TAGGTCAATT TCGTAAAACT
    GACTACAAGA GCAAACCCTA GTTCCTCTTA TGAAATTGCG TTTAGAAAAC
    TAATTATTGA TTGACCTACA ACCTAAAGAG ACTTTCTTTA TGCAGCAGCA
    AGTTGCGCTA AAATTATAAA TCTAAGGTTC CAAGAGATCA AAATAGGACT
    TAGGCTAGAA GCAACAAACC TGAATCTCGT CACAACGACG CATATGATGC
    ATCATCCATG GTTTGCGTCA CCACCTCCGA CTGTCGGTCC ATGATTTGGT
    AAAGATCGTG AAACGCAAAA ACAGAGACGG AAAATAAGAA CGGTGGTGAA
    ATATTTAATC GTGTGATCAA ACGGATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1248464 [Map]; Strand: c
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6918-1 - 3-prime edge
    ATTTAAAACG GNAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCG 
    GCCCCATGAA AAGGGTATTG TTATTGCTCT GCCTCTCTTG TTGTTGTTGT
    TGCCTGTGAA TGGACGAAAG TGGTGGTTTC AAGAACTTGG TTGGGGAGTT
    TTGAATTGAT AACAATGGAT TTATCATAAT TCTTTCCATT GNTTCAGAGA
    GATGAAAACA GAGGAGAAGA AAGGAGGAAG CT

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04580.1

Model type
Protein coding
Short Description
aldehyde oxidase 4
Curator Summary
Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.
Computational Description
aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink).
Link
InterPro Scan - TAIR