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11-6919-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22210878 [Map]; Strand: w
      • AT3G60130.1 - [+] show detail - beta glucosidase 16
        Distance: 0; Region: exon3 (CDS)
      • AT3G60130.3 - [+] show detail - beta glucosidase 16
        Distance: 0; Region: intron2 (CDS)
      • AT3G60130.2 - [+] show detail - beta glucosidase 16
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-6919-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGTA 
    AGAATCATCT GCAATGGACC CATTACTACC ATCCATTATC TTTTCTGAAA 
    ATGAAAATGA CAAAAATATT TATCTTTAAA TTTAATACCA AGAAAAAGAA 
    AGAAGTATCA AGAAGGTTCA TCATCATCAA CCCATTTTTG TTATGAACAC 
    AAGACAAAAC CAGATTCACA TATATGAACC AAACTCCAAC ATTTTGAGGC 
    TTAAATCTTT ATAGAGATCT AAAGCT

AT3G60130.1

Model type
Protein coding
Short Description
beta glucosidase 16
Computational Description
beta glucosidase 16 (BGLU16); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 13 (TAIR:AT5G44640.1); Has 11475 Blast hits to 11098 proteins in 1475 species: Archae - 144; Bacteria - 7936; Metazoa - 718; Fungi - 200; Plants - 1457; Viruses - 0; Other Eukaryotes - 1020 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60130.2

Model type
Protein coding
Short Description
beta glucosidase 16
Computational Description
beta glucosidase 16 (BGLU16); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 13 (TAIR:AT5G44640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60130.3

Model type
Protein coding
Short Description
beta glucosidase 16
Computational Description
beta glucosidase 16 (BGLU16); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 13 (TAIR:AT5G44640.1); Has 11180 Blast hits to 10839 proteins in 1465 species: Archae - 144; Bacteria - 7776; Metazoa - 711; Fungi - 196; Plants - 1395; Viruses - 0; Other Eukaryotes - 958 (source: NCBI BLink).
Link
InterPro Scan - TAIR