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11-6943-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10289424 [Map]; Strand: c
      • AT4G18700.1 - [+] show detail - CBL-interacting protein kinase 12
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6943-1 - 5-prime edge 
    ATGGTGAGGG TTCTAGGTTT GTTTCGGGAG CTCCTGTTTC GAAGATTATA 
    TCGAAGTTGG AAGAGATTGC TAAAGTTGTG AGCTTTACGG TGAGGAAGAA 
    GGATTGTAGG GTAAGTCTTG AAGGTTCAAG ACAAGGAGTG AAAGGTCCAT 
    TGACGATTGC AGCAGAGATA TTCGAATTGA CACCATCGTT GGTTGTTGTG 
    GAAGTCAAGA AGAAAGGAGG AGATAGAACA GAGTATGAAG ATTTCTGTAA 
    CAATGAATTG AAACCCAAGT TGCAAAACTT GACAGCTGAT GATGTAGTAG 
    CTGAGCCTGT CGCGGTTTCA GCGGTTGATG AAACCGCGAT CCTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10289540 [Map]; Strand: c
      • AT4G18700.1 - [+] show detail - CBL-interacting protein kinase 12
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6943-1 - 3-prime edge 
    CTCACCATCG TCATCAAACA AACCCGATAA ATCAAAACCT TGCGAAAACG 
    ATATAATATC AAAAGCATTC AAACTCGCAG GTCTAGGCAA CCCTCCAACT 
    CTTCTCCTAG GCTCCAAATA CTCAATTTCC GACTCAGAAG CAGCAGAATC 
    TCTATCTGAC TCCACCGAGT CAGACTCCAA TTCATCATCA TCAACAACAT 
    TACACAACTT ATCATCCTCC ACATAAAACT TAATATGCTT AAACCCTTTC 
    TTAAACCAAG AATT

AT4G18700.1

Model type
Protein coding
Short Description
CBL-interacting protein kinase 12
Curator Summary
Encodes CBL-interacting protein kinase 12 (CIPK12).
Computational Description
CBL-interacting protein kinase 12 (CIPK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 19 (TAIR:AT5G45810.1); Has 132740 Blast hits to 130588 proteins in 4556 species: Archae - 205; Bacteria - 15732; Metazoa - 48597; Fungi - 13262; Plants - 32355; Viruses - 523; Other Eukaryotes - 22066 (source: NCBI BLink).
Link
InterPro Scan - TAIR