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11-7012-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9573239 [Map]; Strand: c
      • AT3G26165.1 - [+] show detail - pseudogene, cytochrome P450, potential frameshift mutation; blastp match of 4...
        Distance: -1260; Region: intergenic
      • AT3G26170.1 - [+] show detail - cytochrome P450, family 71, subfamily B, polypeptide 19
        Distance: 121; Region: intergenic
    Flanking Genome Sequence: 11-7012-1 - 5-prime edge 
    TTTGGAAGTG GTTTTAACAT AACAAGCACA GGCCCAAATT AATATGGCTA 
    TCCAATCCAT AATTTTTTTG TATTTTTTCT AAAATACTTA TCAAAAGTTC 
    TTTTATTTTT TTACTATATG CCCAAATTTT CATTTTCTTT ACATTTATTT 
    TGTCAAATAA GCCAAAATAT TCAAAAATAG GCAATCATAT TCTAAAATTT 
    TATGATGAAA AATCTTTTAA AGTTCAATAA ATAAGTCCAA ATATTGAATA 
    AAAAAGAAAT GTTTTCTGAT TAGAGCCGTT GCACAAGATT TGAAAAATAA 
    TAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9573308 [Map]; Strand: c
      • AT3G26165.1 - [+] show detail - pseudogene, cytochrome P450, potential frameshift mutation; blastp match of 4...
        Distance: -1329; Region: intergenic
      • AT3G26170.1 - [+] show detail - cytochrome P450, family 71, subfamily B, polypeptide 19
        Distance: 52; Region: intergenic
    Flanking Genome Sequence: 11-7012-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    CCAAACGATT CAAAAAATCG TAGAAAAATA TATCTTGCTG AAGTTACTTT 
    GATCAATCAG ATCCGAACAT GTCAGGTTCC TGAACGTTAC ATTCCTCAAA 
    CAGAATT

AT3G26165.1

Model type
Pseudogene
Curator Summary
putative cytochrome P450.
Computational Description
pseudogene, cytochrome P450, potential frameshift mutation; blastp match of 49% identity and 5.6e-119 P-value to GP|16507125|gb|AAL24049.1|AF426451_1|AF426451 cytochrome P450 {Citrus sinensis}
Link
InterPro Scan - TAIR

AT3G26170.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily B, polypeptide 19
Curator Summary
putative cytochrome P450
Computational Description
"cytochrome P450, family 71, subfamily B, polypeptide 19" (CYP71B19); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 20 (TAIR:AT3G26180.1); Has 32773 Blast hits to 32510 proteins in 1671 species: Archae - 46; Bacteria - 3259; Metazoa - 12067; Fungi - 6747; Plants - 9505; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink).
Link
InterPro Scan - TAIR