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11-7019-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seedling (PO:0008037)
  • desaturated green (PATO:0001272)
    (Seedling::pale green)
  • abnormal (PATO:0000460)
    (Seedling::abnormal shape)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3094570 [Map]; Strand: w
      • AT3G10030.1 - [+] show detail - aspartate/glutamate/uridylate kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G10030.2 - [+] show detail - aspartate/glutamate/uridylate kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-7019-1 - 5-prime edge 
    GGGNTAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATATCA TACGGATTCG AATTTTCGTC CGCCGTGAAA 
    GGATTAACAC CGTGACCGTG GAAAGCAGAA GACGCTTCTA CAACGACATC 
    GTTCTCGTCG TCCTCGTCGC CGTTCCTCTG GTGATGCNGG TAAAAGGATC 
    TGATTCGATG GTTTCGGGTT GAATCGTCTA GGAGCGTAGG GCGTGTGATG 
    AAGAACTTGG TGGTGGTGGT GATGTTGATT AGGGTTTGAC TGATCGTCTC 
    CAAGTAGAGA GAAATCGTCA TCACACGACG CCATTAAAAA TGCCGTTAGG 
    GTTACGGNCG GTGGTAGCAA CCAGAGACGG CGTTAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3094554 [Map]; Strand: w
      • AT3G10030.1 - [+] show detail - aspartate/glutamate/uridylate kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G10030.2 - [+] show detail - aspartate/glutamate/uridylate kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-7019-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    CGCAGCTGTA GACGAAGACG AAGACGAAGA TCTCGGTGCC AACAGATCTA 
    GAATCGGAGG TGTTCGTGTT GAGAAGAGGC AGAGTCAGGA GGAGCTAAGT 
    GACGGAGGAA CAACAAATGG CGGTGAGATT ACTCCCTACG GTAGCTTCAA 
    GAGACCGAGG ACTTCGTCTT CCTCAGCTGG TGAGTATAGG AAGGATAGAG 
    AAGAGTGGAG TGATGCGGCG ATTGCGTGTT TGTTAGATGC GTATTCGGAT 
    AAGTTCACAC AGCTTAATCG AGGGAATCTC CGGGGAAGAG ATTGGGAAGA 
    GGTTGCTTCA TCGGTGAGTG AGAGGTGTGA AAAGCTGAGT AAGAGTGTAG 
    AACAGTGTAA GAACAAGATT GATAATCTCA AGAAGAGGTA TAAGCT

AT3G10030.1

Model type
Protein coding
Short Description
aspartate/glutamate/uridylate kinase family protein
Computational Description
aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7827 Blast hits to 7823 proteins in 2703 species: Archae - 182; Bacteria - 5697; Metazoa - 42; Fungi - 3; Plants - 388; Viruses - 0; Other Eukaryotes - 1515 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10030.2

Model type
Protein coding
Short Description
aspartate/glutamate/uridylate kinase family protein
Computational Description
aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink).
Link
InterPro Scan - TAIR