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Mutant Lines
12-0079-1

12-0079-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 26275862 [Map]; Strand: w
- AT1G69800.1 - [+] show detail - Cystathionine beta-synthase (CBS) protein
  Distance: 0; Region: intron1 (CDS)
- AT1G69800.2 - [+] show detail - Cystathionine beta-synthase (CBS) protein
  Distance: 0; Region: intron2 (CDS)

TGTTTCCGCT TGAATCTCTA TCACTACGAT CAAACAAAAA AACTAATTGA 
ATCTAAACCA TTGCCAAGTC TCAAACTTTA AACGAGAAAT CAGGAAATTT 
GGAGAAATCG AAAAAATGGG ATCTTCCTAA TTTTTACCTC TGCCGCCGGG 
GACTTGAGGG AAGGAGGAGA CGGGGATTCC GGCGAAAGCA GAGTTTAGGG 
TTTCTTGAAG AGATTTGGGT AGATTCTTCC TTGATTGTAC TTTCTCGAAA 
TACGCTTCAC AGCTTGAAAC CGCCGATTTT ATCTCCTTAT CTTCTACCGC 
TTCACTTCCC GCCATCTCTT GATACCGGTT CAATTTGAAG AATTTCAAAC 
AAATCTATGA TGATTTTAGA TTGGAAACGA AGAAACCCAG AAGAAAAAAA 
GANAGCTTTT TTGGTTTAAG GAAAAAAAAN NGAGNGAGGN GGGNGAGGGA 
TTTTNAANCA GGGGGGGGGG ANTTNNNNNN NNNATAACCC CCNTGTNNAA 
ANGGGGNCCT TNNGNTTNNC CTTTTNGGGG GNGNCCCNCC CCNCCNTNNN 
NANGNGNNNT NNCC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 26275746 [Map]; Strand: w
  - AT1G69800.1 - [+] show detail - Cystathionine beta-synthase (CBS) protein
    Distance: 0; Region: exon2 (CDS)
  - AT1G69800.2 - [+] show detail - Cystathionine beta-synthase (CBS) protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 12-0079-1 - 3-prime edge
```
CGGAAACACC TGTATCAGAA GCAGTAAAGA TCTTATCAGA CAGCAAGATT 
CTATCAGCTC CTGTGATTAA CACAGATCAC GAGNGTTCTT TAGATTGGAG 
AGAAAGATAT TTAGGAATCA TTGATTACTC TTCAATCATC TTATGGGTAC 
TAGAGAGTGC TGAACTCGCT GCAATCGCGT TGTCCGCTAC GTCAGCAACT 
GCTGCTGGTG TTGGTGCTGG AGCTGTTGGA GCTCTTGGTG TTGCAGCGCT 
CGGGATG
```

AT1G69800.1

Model type: Protein coding
Short Description: Cystathionine beta-synthase (CBS) protein
Computational Description: Cystathionine beta-synthase (CBS) protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase regulatory subunit gamma 1 (TAIR:AT3G48530.1); Has 879 Blast hits to 799 proteins in 237 species: Archae - 117; Bacteria - 170; Metazoa - 187; Fungi - 63; Plants - 180; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G69800.2

Model type: Protein coding
Short Description: Cystathionine beta-synthase (CBS) protein
Computational Description: Cystathionine beta-synthase (CBS) protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase regulatory subunit gamma 1 (TAIR:AT3G48530.1); Has 884 Blast hits to 801 proteins in 238 species: Archae - 117; Bacteria - 172; Metazoa - 187; Fungi - 63; Plants - 180; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).
Link: InterPro Scan - TAIR