Home
Mutant Lines
12-0100-1

12-0100-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 24479601 [Map]; Strand: w
  - AT1G65810.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon3 (CDS)
  - AT1G65810.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 12-0100-1 - 5-prime edge
```
CCCATCAAAC CTCAAAGACT CAGAGACTAA TTTCACAAGC CTTGAACAAA 
CTTCCAAAAC AGCTATGTTA GTTGGAGCAC AAGTCAATGT CCTGCATCTC 
ATTTTCAGAA AGTTCAAAAG CAGAACACTT GTTGTTTTCG TCTTCCCTGT 
GCCCGGTGGT CCCCAAATAA GTTTGATATT GTTGGAATGG TTACAACTTT 
TAGCTTCAAG ACAACGTAAA ATCGCGTCCT CTTGAGATGA ATT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 24479485 [Map]; Strand: w
- AT1G65810.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: exon3 (CDS)
- AT1G65810.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: exon3 (CDS)

TTGATGGGTA TGGTCTCGGA GATATAGTGT TGTTTGGCAA TAAAGAAAGG 
ATGAAAATCG ATGATCGCGA AGATCTTTTC GATGTCTTCC TTGAGTACCG 
AGTTGATGAG CTTTATAGAT GTTTTATGGC TCTGACTGGA TGGAGAGCAA 
ATGTAAACCG TATGATCTGT TTGCTCAGTG ATCCGAAACA CGAGTTTCGC 
CAATTCAAAT CCGTAAATAC AACACTTCTC TCGTTTAAGG ATTTTGTGGA 
GGAGAGGCTT AGTAGACTAA GATATGATCT GCATCATCAG TTTACAACTT 
TGTGTCTCCA TTTACCAACT TCTTTGCTCT CCTTTAGGGT GGCGGAAAAG 
ATGAACCAGA CTAATAATCT CCTTAGAAAC ATCGCGGCTT CTGATGTCAT 
GAGAGATGGT TATGGAAGAA TGAAATATAA GCT

AT1G65810.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1); Has 6257 Blast hits to 5371 proteins in 1056 species: Archae - 197; Bacteria - 1787; Metazoa - 1336; Fungi - 1200; Plants - 672; Viruses - 106; Other Eukaryotes - 959 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G65810.2

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1).
Link: InterPro Scan - TAIR