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12-0103-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25762594 [Map]; Strand: w
      • AT1G68600.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 12-0103-1 - 5-prime edge 
    TNAGCATTGG ATGTCAACAG AGAGTATGAT GCTTAAGAAC CGAGAGATGT 
    GGCCAAGTAT GTCCTTCATT GGTGGTACTG TGGTGAATGA GATAGAATGT 
    AAAGNATACA GAAAGTGCGA GTTCGTTGTC TCTGGCTACG TCTTGCTTCC 
    CTTCTGATCG AGTTTGTTGC AAGGCTGCAA AACATTGNCA ATGCTTTTGA 
    GGAGCTTANC ACAAAAGCTG GNTTCAAAGA TCCTGTTGAT CANATTCCTA 
    AGGTTTGAAT GTGTGTGAAA GAAGTGATTC ANAAGTGATC GATACACGTT 
    AAATATTATG AACAAGGTGT ATTAAGTGAT TTGTAAGCAA ATTTATTAAA 
    ACAAACATAA TTACATTGNT CTTTTAATTT GTTNTATGTA TATGTGTTTA 
    AATCATTTTG ATAGTGAAAG CANAAAAAAA ACTTCCGTAN TATTTNGGAA 
    TCACNTGTTC AAANAGGAAC GTTTTTAATT AGCNTTTACT TATAAAAGTT 
    TTTNTTNATA AATGGGTTTT TGTTNTTNCN TAAAACCAAA TTTCCGAATT 
    TTAAGNAATC TTTNNTAGCT TGCNNNCTGA ATTNNGGNTA AAAACCTGTT 
    TGTTTCCTTA AAAAANGCCC TGGCCCATTA ANNNTTNGCA AATNTTNGGG 
    AATCNAAAAT TNAANTTTTT TGACCAANNC TTTGNNTTTT TANCAAAAAA 
    GNTTCCAAAA GNTTNTTGTT GGNNNTNGAT TTTNNCCCAA AAAAANCAAA 
    CCTTTTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25762498 [Map]; Strand: w
      • AT1G68600.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 12-0103-1 - 3-prime edge 
    ACTGCTNNGA TNGATCATTA CTCTNATGGN CNTNGNTGNN GATGATNATN 
    NTANNCTCCC ACATCATGGC NTAAGGATNT NAGTCACCTC NGGTGCTCNN 
    NGNCTTGNGG CCTGTCTTGG NCAGCTTTGC TCCGAGCATT CTTCCGCTTC 
    AGCNTTGCTC TTTAATAGCT TGCCCAGCCT TTCTGAGTTG ACAAGAAGAT 
    ATGATTTACT ATCTATTTTC ATTTGTAGTG CCTCGGCTGC TCGTTGAACG 
    TCTTTCAGAA TCTCTCCTAG GCTTAGGCTT AGCTTCTCCA TTTTCTCTAC 
    TTTTTCTCCA AACAAACGTA ATACTTTTGC TCCTTCATTA CCAACTCTCC 
    GAAGCTCGTT ACTGAAAACA TGTCTTTTCT CTGGAGATGC CTGCCATATC 
    ACACAGCCCA TAACATTTAA ACTAAACAAT AATTGAACCA TTATATCTAA 
    CCTAGTAACA TACAAGCCAA CTACATCAAC TTTTTATAAT GCTGAAAACC 
    TGATATATAT ATAAAGAGCT AACTTTATTT TAGAAAACTA AATATGAGGA 
    CCTAAAAGCT ATTTTATCTC ATTAAGTACC TTTGCATAAA TATGTTTTTG 
    AAAAGGGCCT ACAATTACAA TTTTAAATTT TTTCACACAT GTATGCTATA 
    ACATTTATGA CACCTATAAC AAAACGGATT ANACATTTTT TCCCCCGGGN 
    ATTCAATTCA TGTGCCGCCA TCTTTTCTTT TCTTCACATG CTAAACNTTT 
    ATGACGATAC ACACTCAAGG AGTATGTTAC TCTTTNTA

AT1G68600.1

Model type
Protein coding
Short Description
Aluminium activated malate transporter family protein
Computational Description
Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G25480.1); Has 818 Blast hits to 814 proteins in 251 species: Archae - 0; Bacteria - 420; Metazoa - 0; Fungi - 36; Plants - 336; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link
InterPro Scan - TAIR