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Mutant Lines
12-0122-1

12-0122-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 23189037 [Map]; Strand: w
- AT1G62630.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
  Distance: 444; Region: intergenic
- AT1G62640.1 - [+] show detail - 3-ketoacyl-acyl carrier protein synthase III
  Distance: -3191; Region: intergenic

NGTGNATNNA CANGGANGAC AAGGNCTATG GGACGTCNGA CACTGCGGGT 
GNNNNNTGCT TCAANCNTNA CCGATATCGG ANGANTGAAT GGATCACAAT 
CACNGGATCC TNTCTNACAC TNTACANTTN CTGCTAATGA AGTGTTTATA 
GTTTCATTAC TCAGTTTTGT TTGTTTAATA GGTCTCATTC TATTCAGATT 
GGGTAAAATG TTTGTTACAA ACAGTATATG CTTCGGCATT TTTTATTTTA 
AACAGATTTG TGTGTCTACT CTGTTACAAG TATATATCAT CATATGGNAT 
TGACCTTCGA GTCTTGGGTT ACAAGTAAAC GTAACTGTCG TCGCTAATGG 
AAGACAAAGA CTTCCCTCGA AACTAATTCC CCAGCTTAAC TAGGTCTTCT 
ATACAATCCA CAACAAATTG AGAAAGACGN AGATATGATG GCATAATGGG 
AAATGAAGAT TGGTAACTCA TAATGTGATG ATTACTCATA TTGTTTCACT 
ACAACGTGTG TGTTTCCGTG GCGAAGGAAA AGACTATCTA ACCACAGTTT 
TGATTATAAA AAAAACAAAA ACGGCAATTC AAGGCNTGCC CAATGTAAGT 
CTGTAATTAA AAAGTTTTGG ATGATTTTAC AANTTTTAAT ATCCCGNGGA 
TTCNAAGCTA AANTTTTTNT NNATTTNTTT TTNTTTANAA ANATTTGGAA 
GGCAAAACTT TCAGGGGTTT ANCNTTTTTT CNAAAAGAAN ATAT

3 prime edge [+] show sequence

Chromosome: 1; Position: 23498846 [Map]; Strand: c
- AT1G63350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
  Distance: -1215; Region: intergenic
- AT1G63360.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
  Distance: 669; Region: intergenic

CATACACATC AGAAAGACTC AAGAAATTAT TGGATTGCGC AACAGAGATT 
CTAGTTGAAG ATGATTCTAG TTGAAGACCA CTAATCTCTA AATCTCGTGT 
ACGGCTCATA AGTCTAAGAT GAGAAATTAA AAATTGAACC AAACCTGAAT 
CATAAACCAA TTCTTAAGGT TAAAAATTCT AATCTTTCCA AAACTAGCAA 
CTCCTCCACT GTGTTGAGGT CAATGAAACA TCAGAACCTC ACAATCTCAG 
TACTTTCAGA TCCAAACTTG CCTTTTCAGG GATTGAGTAC TCCTACAACT 
TTCTTTTCTT TCTCATGCCA ATAGCTATGG AATTATTAGT ATCAACTAGT 
TTTTGCTAGA ACATCATTAA AAATCACAAG ACTCAGAATC GTTGATCCAC 
ATCCCAATCA ATTTGCAGAC ATTCATCACT AATTAACTAG TCTTCAAAGT 
ATGTTTCATG TGGATGGCAA GGACTATAAA AAGAACTCAC ATAAAGCAAT 
AATACAGAGT GTGATACTGA TTACACAGAA TGCAAGAAAC ATAACAGAGA 
GATAAACAGA TAGAGAATT

AT1G62630.1

Model type: Protein coding
Short Description: Disease resistance protein (CC-NBS-LRR class) family
Computational Description: Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G63360.1); Has 16042 Blast hits to 14596 proteins in 629 species: Archae - 18; Bacteria - 843; Metazoa - 2230; Fungi - 170; Plants - 12480; Viruses - 6; Other Eukaryotes - 295 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G62640.1

Model type: Protein coding
Short Description: 3-ketoacyl-acyl carrier protein synthase III
Curator Summary: 3-ketoacyl-acyl carrier protein synthase III (KAS III)
Computational Description: 3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 11800 Blast hits to 11794 proteins in 2811 species: Archae - 187; Bacteria - 7763; Metazoa - 5; Fungi - 2; Plants - 1625; Viruses - 0; Other Eukaryotes - 2218 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G63350.1

Model type: Protein coding
Short Description: Disease resistance protein (CC-NBS-LRR class) family
Computational Description: Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 18724 Blast hits to 16763 proteins in 698 species: Archae - 14; Bacteria - 926; Metazoa - 3029; Fungi - 209; Plants - 14107; Viruses - 4; Other Eukaryotes - 435 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G63360.1

Model type: Protein coding
Short Description: Disease resistance protein (CC-NBS-LRR class) family
Computational Description: Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 17830 Blast hits to 15790 proteins in 633 species: Archae - 28; Bacteria - 1230; Metazoa - 2561; Fungi - 201; Plants - 13411; Viruses - 6; Other Eukaryotes - 393 (source: NCBI BLink).
Link: InterPro Scan - TAIR