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Mutant Lines
12-0182-1

12-0182-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 10334015 [Map]; Strand: w
  - AT5G28370.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
2. Chromosome: 5; Position: 10375470 [Map]; Strand: c
  - AT5G28460.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 12-0182-1 - 5-prime edge
```
GAAGGCATCA TCCACAAGTC CATTTCTTAG CAAGACGTCT ACCACAACAT 
TACGAACCTG CGAGTTTTTC ATATTCGAAT CGAGTCTTTC GTATACAAGA 
ACCGACTGAT TCACCATACC CATACGCCCA AACCATCGGA TCAGAAGCT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 10333944 [Map]; Strand: w
- AT5G28370.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)
Chromosome: 5; Position: 10375541 [Map]; Strand: c
- AT5G28460.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)
Chromosome: 3; Position: 22770660 [Map]; Strand: w
- AT3G61520.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTCAAGGTGC TCGACGAAAT GCTTCAGAAA GAATCTGTTT TTCCTCCTAA 
TAGAATCACA GCGGATATTG TGTTACACGA GGTTTGGAAG GGAAGGCTTT 
TGACAGAAGA AAAGATAATT GCTTTGATTT CACGATTTAG CTCTCATGGT 
GTCTCCCCAA ACTCTGTTTG GTTGACTCGG TTTATATCAA GTCTATGCAA 
AAATGCTCGC GCCAATGCTG CTTGGGATAT TTTGAGCGAC CTGATGAAGA 
ACAAAACCCC ACTTGAAGCT CCTCCCTTCA ATGGGCTTTT GTCTTGCTTA 
GGAAGGAATA TGGACATTAG TAGAATGACT GATTTAGTCT TGAAGATGGA 
TGAGGTGAAA ATCCGGCCTG ATGTTGTGAC TTTAGGGATT CTTATTAACA 
CTTTATGCAA ATCAAGAAGG GTAGATGAAG CTCTCGAAGT TTTTGAACAA 
ATGCGTGGAA AGAGAACTGA TGATGGAAAT GTGATTAAAG CTGATTCGAT 
TCATTTTAAT ACTCTCATTG ACGGGCTCTG CAAGGTGGGG AGGTTGAAAG 
AAGCAGAGGA GTTATTGGTA AGGATGAAAC TGGAAGANAN ATGTGTGCCC 
AATGCAGTTA CTTACAAATT GCTTGATTGA TGGGTATTGA GAGCTGGAAA 
GCTACCANCC CGGGCCGTNN ACCACCTGCC CCNTNTNA

AT3G61520.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395 proteins in 309 species: Archae - 5; Bacteria - 71; Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0; Other Eukaryotes - 1868 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G28370.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 52907 Blast hits to 14569 proteins in 306 species: Archae - 7; Bacteria - 68; Metazoa - 890; Fungi - 845; Plants - 49290; Viruses - 0; Other Eukaryotes - 1807 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G28460.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G61520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR