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12-0215-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22894070 [Map]; Strand: w
      • AT1G61930.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: 94; Region: intergenic
      • AT1G61940.1 - [+] show detail - tubby like protein 4
        Distance: 3329; Region: intergenic
    Flanking Genome Sequence: 12-0215-1 - 3-prime edge 
    TAAATAAGAA CATTATCTAG CATTTTTTAA AAATCTCAAA ACTTACGTTG 
    CACCTGATAA TTTTAACTAC AGCTAATTAA ACTAATTAAC ATAAGACAAA 
    ATTATTTTCG AGTTATAATA TACATATAGA CAGAACAACA ACATATACGA 
    GGAACCTTGA AATTTTGGTC TCGTTCATAA TAAAAGTCAA AATTAAAAAT 
    TTGCATAATC ACAAAAATTA CTTCTATACT GGCAAAAACA AGTAATTTTA 
    ATTGAAATCT AAAATGTTTT TTTTTTNAGT TTNGTAAATT ATNCTNACCC 
    GNAAAACCCN GTTGGGNNCC AAATCGNGTN NCAAACNCCC CTNANTTNTN 
    NGCCTTNGAN AGNCCTTCCN ACCCCGNAAA ANNCCGACNC NCCNCCNCCT 
    CCGATTTTTT NGNNCCGCCG GGCTNGACTT TTAANANGGN ACTCNNGNGG 
    GGGNTTCNTC CNGGATTCCT NATCCTGGNN ATCCNCGGNG TNNAACCCGG 
    GTNTGGACNC ANCCGGNTCA CCCCGGGTTN TTTTANTCNN GNCCGGNCCG 
    TTTNCCGGGG CCAAAAACNC CAATTTTTTC NGGTNTTTTT TNNGCCNTCN 
    CCNCCCCCCC NGGNAATTTT NGGGANTTTT NTTGGGAAAA AAAACGGGGG 
    GNGNCCNCCA AAAAGCCCCT NNAANGCCGG NGAAAAATCN TCCCCCCNCC 
    CCCGGNTTTT TCCCAGGGGG GCNGNAAAGT CCCCGGNCCC N

AT1G61930.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF584
Computational Description
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT1G11700.1); Has 322 Blast hits to 321 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61940.1

Model type
Protein coding
Short Description
tubby like protein 4
Curator Summary
Member of TLP family
Computational Description
tubby like protein 4 (TLP4); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 436 Blast hits to 371 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 436; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR