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Mutant Lines
12-0256-1

12-0256-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 16689230 [Map]; Strand: w
- AT5G41740.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: intron2 (CDS)
- AT5G41740.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: intron2 (CDS)

TTAATTGGTA TGTCTCGATG AATTTTAATG CTTTTTATTT TATTTTTCTC 
AAGCAATTTG TTTTTGTAAA TTTAGACCAA CCAAATCTAT TTGGTTTTGC 
TTTTGTTAGG GATAATGAAG CAGATATGAT CCAAAAGATT GTTACAGATG 
TTTCAGACAA ACTGAATCTC ACACCGTCGA GGGATTTTGA GGGGATGGTA 
GGGATGGAAG CTCACTTGAC AGAATTGAAG TCTTTGTTAA GCCTGGAAAG 
TGATGAAGTC AAGATGATTG GAATTTGGGG TCCAGCGGGA ATTGGTAAGA 
CTACCATTGC TAGAGCTTTA TTCGACAGAC TCTCTAGTAT TTTTCCGCTT 
ATATGTTTTA TGGAGAACCT CAAGGGAAGT CTTACGGGTG TTGCTGACCA 
TGATTCCAAG TTGAGGTTGC AAAACCAACT TCTGTCTAAG ATTTTGAACC 
AAGAGAATAT GAAGATACAT CATTTAGGCG CNCCTACGAG AAAGGCTACC 
CCNATCAAAG GAGTGCTCAT CATTCTTGAC GATGTAGATG ATCTNTGANC 
AATTANAAGG TATTTGGCTG AAAATCCTTN TTGGTTTTGG TTCTGGCCAG 
TCCGATCATC CTTTCCNCNG GAAGATAANA AAGAATTTTG AAAGCCCCTT 
NGGATTAAAG GATATNTANC NANGNGAATT TTCCATCTAA GAAANNAAGC 
CTCTGGNAAT CTTNT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 16694465 [Map]; Strand: w
  - AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon1 (CDS)
  - AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 12-0256-1 - 3-prime edge
```
CCAATTAAGA GAGTGTTCCC CAGCAATGAT AGCGACATCT GCCAAAGCAT 
TTCTCCATCT CTGCTCCACT TCCTCATTTT TCCCTTGACA AGTCTTCTCA 
AAAACTTTCC CGAACTCTCC ACTCTGTTTC TTAACATCTG ACGGATCAAC 
TTCGTAAAAA ACCGTCATCA CAATCTGCAC CAAAGCT
```

AT5G41740.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41740.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 3146 Blast hits to 2582 proteins in 174 species: Archae - 0; Bacteria - 334; Metazoa - 256; Fungi - 13; Plants - 2498; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR