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Mutant Lines
12-0311-1

12-0311-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 191969 [Map]; Strand: w
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -1600; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 1732; Region: intergenic

GTCACCACCA CCATATTGGG CGCGGNCGAT CANACACCAC TTATTAATCA 
TTGTCTACTT CTTTTATTGG AACATCCGAA TATATATCTG TAAAACACAC 
TCATCCAAAT AAAGTTCTCC CAAACTTTTA TGGTTAATGG CTTAAAAAGC 
AATGCTAAAA TTAAGCCTGG ACATTCGGAT TTTGGTTCGG ATTTTTTCGG 
ATTTGGATAA TTTCTGATGA GGGAGTTTAT TATCCGTTTG GATGATATGA 
CTATTCGGTT CAGTTTCGGT TTGGATGATG TCGGATTCGG ATCAATTTCT 
GAAAAAAGAA ACTAAAAAAT TGTTCAATTT TTTTAAAAAA ATTGTTTAAT 
TTTGCAAAAC ATTGTATAAT TATAACAAAT ATAACTAATA ATAATTCGGA 
TATCAAGGNT ATTTCTGATA TTTGNGGATA TAAATTATAA CTAAATATAA 
CTAATATTTT TATATATATA CCTTTATTTT GGATTNAACG GANATNCNNN 
NNNNTTTNGG NATNNGANCN GGATNTNNNN GGGNGANTNN NNANNNGGGG 
NGGNAANNNG NNGNNNNANA NANAAANNAN NGNNNNNGNN GNNG

3 prime edge [+] show sequence

Chromosome: 2; Position: 191849 [Map]; Strand: w
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -1480; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 1852; Region: intergenic

GTGGTGACTA CACAAATCAG GGTGATGTAA CAATTGTCTT AAACATTTTC 
TATTCTTTTT GAAACGTAAT AAACGCAAAT CATATCATGC ACCAACAAAT 
AGAATCATTC TTTACAAACA AAAAAGAGTA AAAAATAATA ATGATAATCG 
GTAGTACCAA TTTATTTTGG AAATGTACAC TAGATAACCC TGCATTTATA 
ATAGATTGAT AATTGACCTT GACCTTTAAA ACTACATTTT TGTTGATTAC 
TATTTGACCA ACATAATTTC ACAAAAGTGC ATACAAATAT TTTCATCAAT 
CCACACGAAA AATGACATAC CCCTTTATTT CCTATTTTGC CACCATAGTA 
AACTACTTAA TAAAGGGGTA TATGCTTTAT TTAACCTAAT TTAACCTTTA 
TTTTGTTGTG TATAAGTCCT AATGTTTGTA TAAACATAAG TATAAATCCT 
TACCTTTTGA ATAATAAGCT

AT2G01430.1

Model type: Protein coding
Short Description: homeobox-leucine zipper protein 17
Computational Description: homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01440.1

Model type: Protein coding
Short Description: DEAD/DEAH box RNA helicase family protein
Computational Description: DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR