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12-0324-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 63230 [Map]; Strand: w
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -180; Region: promoter
    Flanking Genome Sequence: 12-0324-1 - 5-prime edge
    NTTGTGAGTG AAAGGCAANA GANAATCTTC AAGNNCATCG GGAACTNGGT 
    CGATCATCGG ATTANGTCAT TCATCGGATT ANGTCATTTA GGGGTTTACT
    TCTTAGAGAT GGTTAACATT TTGGTATTAA TAAGTAAACC GATCGGATTC
    GGTTCGAATT TAAACAAAAC CGAGATATTG AATGAGAAGC CCTAGTCTTA
    TCACATTCTT CTACTCGTTG AAATGCGAAT AGTCATTAGG GATTCAGTTT
    TGTTGAAATG CGATTTTAGC ACTGGAAAAA CATAAGCCTG AAGGATTTCA
    CCGACAATGG AACAAGGGTA AGTTTCTTTG TTTCGTTTGT GTTTTTTTGT
    CTCCGTTTAA TGGGTCTGGA CTCCGGCGCA TTCTCTGTTT CGTTTGTGTT
    TGTGTTTCTT TGTCTCCTTT TCAAGTCTCT TGATAGACAG ATCCGTGATT
    CCATTCTTGC AAAGAGGAAA CGAAAGGTTT TCAATTCCCT CATGCGATTA
    TGGCTGAAGT ATGACTAGAC AACTTTTCTA CTCATATATT TCTTCTCGTA
    GATTCTTAGC TTCCTTGTTT TGATCTTTTT TTGCCAAGGA TGAATCTGTT
    GTATTACAAA CTTTGTAGCT TCTTTCTACA AGCAAAACAA AAAAAAACTC
    NAAACCCTAA TTTTAACCTC TNGCCTTTTT TTGGGTTTTG CTANNGAAAA
    GNTNGCGAAT

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR