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Mutant Lines
12-0344-1

12-0344-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 4792837 [Map]; Strand: w
  - AT5G14820.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
2. Chromosome: 3; Position: 23107365 [Map]; Strand: w
  - AT3G62470.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
3. Chromosome: 3; Position: 23134279 [Map]; Strand: w
  - AT3G62540.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 12-0344-1 - 5-prime edge
```
NGGACATTAA GGCAAGGNCC NTTGGATNTN ATAACAGTGG AACAATTTGA 
TCGCATCTGA TNTTTTCCTA CTCCTNAACA ACCCTTCAAG CATNACGATG 
TGAGCGTACA ATGNCAGGTT TCAATCCGTG ATCAATCATA TCATTCCAGA 
TTCTAGCTGC TTCTATCAAG TTCCTCACCC TGCACCAACC ATTGAGTAGA 
ACAGTGTAAG TCATCATATT AGGTGTAAAC CTCTCCTTCA GCTTATCAAA 
CAGAACCTGA GCTTCTTTTT CAAGCT
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 23107249 [Map]; Strand: w
- AT3G62470.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)

AATGTCCGTA GCTATACCAT CATGATCCGG GACTTCTGCA AACAGTCGAG 
CATGGAAACT GCCATTGAGT ACTTTGATGA CATGGTTGAT TCCGGGTTGC 
AACCTGATGC TGCGGTTTAC ACAGTGTCTG ATCACGGGGT TTGGGACTCA 
GAAGAAGCNT GGATACCTGT TTACGAACTG CTCAAGGAGA TGCAAGAAAA 
GGGACATCCT CCGGATGGCA AAACGTATAA TGCGTTGATC AAACTGATGG 
CGAACCAGAA AATGCCGGAA CATGCCACAA GGATCTACAA CAAGATGATC 
CAGAACGAAA TTGAGCCATC GATACACACA TTCAACATGA TAATGAAATC 
ATACTTCATG GCGAGAAACT ATGAGATGGG GAGAGCAGTT TGGGAAGAGA 
TGATCAAGAA AGGGATTTGT CCTGACGATA ACTCCTACAC GGTTTTGATC 
AGAGGGCTTA TAGGTGAAGG CAAGTCGAGA GAGGCATGCA GATACTTAGA 
GGAGATGCTT GACAAAGGAA TGAAAACCCC TTTGATTTGA TTATAACAAG 
TTTGCAATCT GATTTCCACA GAGGGGGGCA ACCNNTAAAT ATTTNAGGAN 
TTGGCACAGA GAGCTTAGTT CTCAGGTAAG TTTGCTGCAG CAAGAAATCT 
TTGCATAGAT GGGCTCAAAT GACTAGANGG AGATTCNNAC AGAGGTTCAT 
GGAANNATTG ATGACTTGGG GGCGGGN

AT3G62470.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62540.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G14820.1); Has 36772 Blast hits to 11783 proteins in 282 species: Archae - 3; Bacteria - 24; Metazoa - 449; Fungi - 549; Plants - 34543; Viruses - 0; Other Eukaryotes - 1204 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14820.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 37965 Blast hits to 11999 proteins in 283 species: Archae - 3; Bacteria - 24; Metazoa - 443; Fungi - 549; Plants - 35727; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink).
Link: InterPro Scan - TAIR