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Mutant Lines
12-0358-1

12-0358-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 22074534 [Map]; Strand: c
- AT1G59970.1 - [+] show detail - Matrixin family protein
  Distance: 0; Region: exon1 (CDS)

GGNATANNGN CNCTCANGGT TGGGGGANAA ANCNNCNNCG NCTANATTNA 
GATNTCNACN NNNNGATTGC TNGGATCCCG TTCAATATNA TNCNTATCTA 
ACATGGCATT TACNATCTNC ACCTAGACAT NTGATGGANA CATAATTCGC 
ATNTTCCATC GNCGAATGAC CTANGCCTAA AANATGACCA ANCTNATGAA 
CNGNCAGNGN TTCNAGATCC ACCNCCGGGN NNNGCGGNNA TATCNAACGA 
CTAATANCAN CGTTAGAGAT NANCCAATCC TNATCACGNG NCTAAATGTA 
ACATCCCCGT AGGAGGCGAA GAAGCATGCG CTAATGTTCC CATAGCTCCA 
TCAAACGGCT CTCCATCACC ATGTTCACCG GAGAAAAATC CGATCACTAT 
ATCAGCACGG AGGATAGACT CAGAGCGCGT GAAATTCAAC GGAGTCACCT 
CCGCCCAACG CGTGAAGGCG CGTGAGAACA CGCGTTTAAC CTCGTCTGTT 
AAATTATTCT GCGGCGCAAA CGCATAAGTC AGATC

AT1G59970.1

Model type: Protein coding
Short Description: Matrixin family protein
Computational Description: Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT1G24140.1); Has 2665 Blast hits to 2469 proteins in 210 species: Archae - 2; Bacteria - 119; Metazoa - 2216; Fungi - 6; Plants - 186; Viruses - 42; Other Eukaryotes - 94 (source: NCBI BLink).
Link: InterPro Scan - TAIR