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12-0363-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29321872 [Map]; Strand: w
      • AT1G77990.1 - [+] show detail - STAS domain / Sulfate transporter family
        Distance: 0; Region: intron5 (CDS)
      • AT1G77992.1 - [+] show detail - other RNA
        Distance: -539; Region: promoter
    Flanking Genome Sequence: 12-0363-1 - 5-prime edge 
    AATACAACTG ATATTAGCGG TGCCATCGCT GGAATCCAAA ACAACTTATT 
    GTTTCTTTTT CCCTGTATTT ACAAAAATCA TTATTAAAAA ATTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29321756 [Map]; Strand: w
      • AT1G77990.1 - [+] show detail - STAS domain / Sulfate transporter family
        Distance: 0; Region: exon6 (CDS)
      • AT1G77992.1 - [+] show detail - other RNA
        Distance: -655; Region: promoter
    Flanking Genome Sequence: 12-0363-1 - 3-prime edge 
    GTTGTATTAG CAACACTAAT AGTGTATTTA TCCAATGCTG AGTCACGAGG 
    GGTTAAGATT GTTAAACACA TTAAACCAGG GTTTAACCAG CTTTCGGTTA 
    ACCAATTACA ATTCAAAAGT CCACATCTTG GTCAAATCGC CAAAATTGGT 
    CTTATTTCTG CAATCATCGC CCTAACGGTT AGTAATAAAT ATATGCTCTT 
    ACTTATAAAT TATTAATCAC TGATCAATCA GTAATTAATT GATTTAAAAT 
    GAATGAAATA ATACAGGAAG CAATCGCAGT GGGAAGATCG TTTGCGACGA 
    TCAAAGGATA TCGTTTGGAT GGGAACAAAG AGATGATGGC TATGGGATTT 
    ATGAATATCG CTGGTTCTTT ATCTTCTTGC TATGTAGCTA CCGGTAAATT 
    CACTTTTCTT TTCGATCTTC TTGTCTTTTT GCGTAACTTA ACCCAGTTTA 
    GTAATTAAAA TTAGGCATGT CCATTTTTTA TAAACGTTGT GTATTAACAC 
    TTATGGTGGA ATT

AT1G77990.1

Model type
Protein coding
Short Description
STAS domain / Sulfate transporter family
Curator Summary
cDNA encoding a sulfate transporter.
Computational Description
AST56; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: slufate transporter 2;1 (TAIR:AT5G10180.1); Has 9792 Blast hits to 9696 proteins in 1853 species: Archae - 35; Bacteria - 5971; Metazoa - 1157; Fungi - 422; Plants - 555; Viruses - 0; Other Eukaryotes - 1652 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G77992.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G77990
Link
InterPro Scan - TAIR