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12-0438-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 619226 [Map]; Strand: c
      • AT2G02350.1 - [+] show detail - SKP1 interacting partner 3
        Distance: -135; Region: promoter
    Flanking Genome Sequence: 12-0438-1 - 3-prime edge 
    TTTGTATTTN GGGGTCATAT GGGCCTTTTA CAATAGAGAA GCCCATAAAA 
    GAGAGCCGTT GATTTGGGCT TTCCGGCAAA CACTCGTAAG AACCTTGTGA 
    GTGATCAAAA CACTATGTTT CTTCTCAATA TACTGAAATC GTTCATGTGA 
    GAATTATGAA CATTATAACA TCAAAAATCC AAATTCAGAA ACATTACTAT 
    CCACAAATTA GAGGCCAAGA TATACAACAC AGTTATTTAA CTNGGTTTGA 
    CATCTATACT GAAACCAAAA CATAACCCGA ATCATCCAAC CGTTCTTCCA 
    CGGGAAGCCG GTTTACATAA ACATACCATG ATACCAACAT CCTCCACTTG 
    AAAGAACACG GTTGGAACTT AACTTTTGTT GTTCACCACA TAAAACCTAA 
    CATAACCAAT CAATACAATA AACAACCGAA TATACTTTTA TCAATTTGAA 
    TTTACCTCTT CGGTCTTCCC TCCACCAATA ATACCAATAG ATGAGCCGAT 
    AATCGGGTTG TTCCGCCGCA TTACTTCAGA GGATTTTAGC AGGNCGGATT 
    TCAATTCCTT GAATGATCAA GCCACACTTC CNATTTGAGC TGCTTAGTCT 
    CTAANGCACT CATCTCAATT TCATCATTAT CCAATTNTTC CTTCCATCAT 
    TGAAGAACTC CCCCAAGCTT AATTCTCCAA NCAACCCNTC TTTNTNTCTG 
    CNTAAGGTTA NNNANCGNNC CTNCTTTC

AT2G02350.1

Model type
Protein coding
Short Description
SKP1 interacting partner 3
Curator Summary
encodes a protein containing an F-box domain and physically interacts with SCF subunit SKP1/ASK1. The protein also exhibits similarity in sequence to phloem protein 2 (PP2) from cucumber.
Computational Description
SKP1 interacting partner 3 (SKIP3); BEST Arabidopsis thaliana protein match is: phloem protein 2-B10 (TAIR:AT2G02360.1); Has 311 Blast hits to 302 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 311; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR