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12-0453-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22663357 [Map]; Strand: w
      • AT1G61420.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-0453-1 - 5-prime edge 
    CNNGAAAAAC TAACAAAATC GGNTATACGA TAACNGTCTA CTACTGNATT 
    NTCCCATCCT ANTTNCNTNC CTAANTATAA NNANGCGGGG GGGAGNTANC 
    AANCAATAGA GGNTATATAT ACAACNANTC TNTACNTAAA NNANCTNNAA 
    ATCNACTACC NCNTNNATGN AAANATCACC AGCTCAAAAT AANCTACNAT 
    TNACAAGCCG ANCTTNCTNT CGTTCNCCNA TNCAAACCTA GTAACNGGGG 
    GGGGAACCCT ACTATACNGA GCNAATAANG GGNAGAAANA CNNATCCACT 
    TTNTTACCCA TATTTGTTAT TTCTCTCCAA AAACTATCTT TTTTANATTA 
    NCCTTTACAT AAAGCGAGAA ANCNANAAAA ANAAAAAANA NNNCCGCTNN 
    NCAAGTTTNN NNNNGGGGNN CNCNGNNNCC NNNNNNGNNN AANNNNNNNN 
    NCNNACNANN NNNGGGNNAA NAGNNTGAAN NCCGNANANN GNNGNNNGNC 
    NNNNNNNGNN CACCNGGNAN CCNGGGGGGG NNGGNGGNCN AGNNNNNGCN 
    NGNNGNNNCA GCGCGGNNNN NCNNCNNCNN NNGNGANNGN NGCGNNNNNN 
    ACNNCGNGNN GNCNNNNNNC NGNTCNNNNN AACCNACANG NANANNNANN 
    CACNNANNNN ACGNNNGNNN GGNNNNNNGC NNNNCNNNNN CNNANNNNAC 
    NNAANGGNGG NNNNNNNCNG GNNCNNCNNN GNNCCANNTC NTGGNNNNNG 
    GAACNNNGNN NNCGCCCCCA GGNNNGNANC GGNNNCGGAN GANNANAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22663331 [Map]; Strand: w
      • AT1G61420.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-0453-1 - 3-prime edge 
    GTTGTGTGGG TGGCCAATAG AGAAAAGCCT GTTACAGATT CCACGGCAAA 
    TCTCGCTATC AGCAACAATG GAAGTCTTCT GTTATTTAAT GGCAAACATG 
    GCGTTGCATG GTCCAGTGGA GAAGCTCTTG TTTCTAACGG GTCTCGTGCA 
    GAGCTTTCAG ACACCGGAAA TCTTATTGTC ATAGACAATT TTTCGGGAAG 
    AACTCTATGG CAAAGCT

AT1G61420.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 124891 Blast hits to 122927 proteins in 4589 species: Archae - 114; Bacteria - 13852; Metazoa - 46086; Fungi - 10635; Plants - 35417; Viruses - 454; Other Eukaryotes - 18333 (source: NCBI BLink).
Link
InterPro Scan - TAIR