1. Home
  2. Mutant Lines
  3. 12-0467-1

12-0467-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23315444 [Map]; Strand: w
      • AT1G62950.1 - [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0467-1 - 5-prime edge 
    TTNCGGGNNA CTTTGTNAAA ACTAACAAAT TCGGTTATAC NATAACGGTC 
    GGTACGGGGA TTTTCCCATC CTACTTTCAT GACCTGACAT NCCNANNNCG 
    CNGGNCNTAT AANCTGNAGA ATATTACAAN NATTAAAGAT TCCTCCAAAA 
    AAANATATCT TTNGAACACT ANTCTCACCG AAACCCTAAC GCCGGCATTN 
    TCTGGTTNAA CTTCTTTAAN GGTTTTGACT CTNTTTNGCA ACAAGATTAC 
    NGGGGGGGNT ACCTTTGGAT TACTNAAAGG GGNGNGAAAA TATGGAANAT 
    CAATGTTACT TCCAATNCAT TNTCTGGTTN GNNTNNTNAA TNNATNNNNN 
    NAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23315415 [Map]; Strand: w
      • AT1G62950.1 - [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0467-1 - 3-prime edge 
    AGCATTAGAG ACCCAAGAAG CTAAACTGTT GTACGGATCA TCGTTGATGT 
    TGTCTTTGAA TTGAAGTAGA ATCTCTCGTT CGGTAAGAAT AGAATCCGAG 
    AAACTTCGAG ATGATGTAAT AATAATGTGA ACGAATATGA ACATTATTAC 
    CCAAATCAAT TTCCCAATCT GCATTTGCGG TTATCGGATC

AT1G62950.1

Model type
Protein coding
Short Description
leucine-rich repeat transmembrane protein kinase family protein
Computational Description
leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G12460.1); Has 173083 Blast hits to 114691 proteins in 4339 species: Archae - 116; Bacteria - 15745; Metazoa - 52877; Fungi - 7816; Plants - 76612; Viruses - 257; Other Eukaryotes - 19660 (source: NCBI BLink).
Link
InterPro Scan - TAIR