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12-0503-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21116258 [Map]; Strand: w
      • AT3G57060.1 - [+] show detail - binding
        Distance: 0; Region: intron12 (CDS)
      • AT3G57060.2 - [+] show detail - binding
        Distance: 0; Region: intron12 (CDS)
    Flanking Genome Sequence: 12-0503-1 - 3-prime edge 
    GTCACAGGTA TGCTTGTATT GATGATATAT CCTTACACCT GTTTTGGGTT 
    TAATAAGAAG TATATCCCTT TGACATCTAC ACCTAAACTT GCAGATGGAA 
    AACAGTGGGA ATACATTTCG TATTCTCTTT CGCTGCTGAC ATTCACAGAA 
    AAGGGAATCA AAAAGCT

AT3G57060.1

Model type
Protein coding
Short Description
binding
Computational Description
binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1); Has 13948 Blast hits to 8962 proteins in 742 species: Archae - 66; Bacteria - 1309; Metazoa - 5536; Fungi - 1705; Plants - 572; Viruses - 208; Other Eukaryotes - 4552 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57060.2

Model type
Protein coding
Short Description
binding
Computational Description
binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1).
Link
InterPro Scan - TAIR