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12-0534-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23497801 [Map]; Strand: c
      • AT1G63350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: -170; Region: promoter
    Flanking Genome Sequence: 12-0534-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCANGNC 
    CTTCTCGGAA ACTTTGATCG TNTGATATAT CAATAATAGT AATTTCTTCT 
    TTTATAAATC TCACATTCAC ACCCGATTTG GTAGAGCGTG GCGGNTGTTG 
    ACCTTTGCTA GGCCACACTA TTTACAAAGT CTCCATTGGC TAGTGGCCGA 
    ATGACCTGAC GTGAAAATAA CTTTCCTCTC TTACATTTGT CTAAATATAA 
    CTTNCTTGGG AAAAAAGCTA AAACAACTGA TAGTTTTGCT TTCAATTGTT 
    TCTAAATAAA AAAAGATAAA AAAAAATTTA GCTTCGAAAT CACCGGATAC 
    TAAAATTGTA AAATCATCAA AACTTTTAAT TACAGACTTA CATTGGCATG 
    CCTTGAATTG CCGTTTTGTT TTTTTTATAA TCAAAACTGN GTTANATAGT 
    CTTCTCCTTC GCCACGGAAC ACACACGTTG TAGNGAAACA ATATGAGTAA 
    TCATCACATT ATGAGTTACC AATCTTCATT TCCCATTATG CCATCATATC 
    TTCGTCTTTC TNAATTTGTT GGGGATTGTA TANAANACCT AGTTAAGCTG 
    GGGAATTAGT TTCGAGGGAA GTCTTTGTCT TCCATTANCG ACNACAGGTT 
    ACGTTTACTT GTAACCCAAN ACTCGAAGGN CAATTCCATA TGATGATATA 
    TACCTTGNAA CANAGTAAAC ACACAAATCT GTTNAAATAA AAAATGCCGA 
    AGCATATACT GTTTGTAACA AACATTTT

AT1G63350.1

Model type
Protein coding
Short Description
Disease resistance protein (CC-NBS-LRR class) family
Computational Description
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 18724 Blast hits to 16763 proteins in 698 species: Archae - 14; Bacteria - 926; Metazoa - 3029; Fungi - 209; Plants - 14107; Viruses - 4; Other Eukaryotes - 435 (source: NCBI BLink).
Link
InterPro Scan - TAIR