1. Home
  2. Mutant Lines
  3. 12-0584-1

12-0584-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15168782 [Map]; Strand: w
      • AT2G36145.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT2G36140.1 - [+] show detail - pre-tRNA
        Distance: -80; Region: promoter
      • AT2G36150.1 - [+] show detail - pre-tRNA
        Distance: -796; Region: promoter
    Flanking Genome Sequence: 12-0584-1 - 5-prime edge
    GGCAATTGTA GCAAATGCGN CGCCNGGAAA CGGTGGCCGT TAAGGCCGAG 
    GAANAANACG GAGTTTCTCT GGGTACTATG AAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15168714 [Map]; Strand: w
      • AT2G36145.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT2G36140.1 - [+] show detail - pre-tRNA
        Distance: -148; Region: promoter
      • AT2G36150.1 - [+] show detail - pre-tRNA
        Distance: -864; Region: promoter
    Flanking Genome Sequence: 12-0584-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    ATTGCCCTCT TCACTTGCCG GGGACTCGCT GCACCATTAG TCGGAAGAAC
    TTGGAGCAGG CAAGGAATTG AGAGACGGCC AAGGAATCTA GCCGGAGATC
    GGACGGCTAC TGGAGGTGGA ACGAAGAGCG TCGCTGCGAA AGCCATTTTC
    CTACTGTCGC GTCCTTCACA TAGTGAGAGA TAGCTTTTTA GAGGATATGA
    GTTGAAACAT GAAAATCTTG ATGACGTGTT CTTTTTTAAG CCGTTGAATT
    GATATGAACG AGGCAAATTA CAAAAAGAAA TAGAGAGTGA TTTAACGTAT
    TTCAATCATT TTTTTCCATC AAAGTAGAGT CAAGACTTAG ACAAAAACCA
    GTCTACAATA GTATCAAGGG ATCAGTACAC AGAGTTATAG TTCTTCATGT
    CATAAACGGT TTACTAAATG CTTCTTCTTC TCCTTGACAA AAACTCCTCT
    GCCCCAATCA ATCGATCACT TTGGTCCTTA NAATCTTCAC TTCATGGATC
    GGCCTGGAAA TTGAGAATAG AAAAGAGATT CCTTCGATTA GTTGGGGTTT
    TTCACTCGGN GGTTAATTCT TGTTGATTCC AAATGAATAA TCAACTTTCC
    TGTCGGTGTT ATCGGNTTGG ACACTACCGA NCCTNTTGAT CACCTNCATG
    CCTTGGCACA CTCTACCAAT ATTGGGGGGT TTCCTAAAAG TTGCNTANAN
    ATGTGAAAAN AAAACCCACC ANNCAT

AT2G36140.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Asn (anticodon: GTT)
Link
InterPro Scan - TAIR

AT2G36145.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36150.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Leu (anticodon: TAG)
Link
InterPro Scan - TAIR