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12-0584-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15168782 [Map]; Strand: w
      • AT2G36145.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT2G36140.1 - [+] show detail - pre-tRNA
        Distance: -80; Region: promoter
      • AT2G36150.1 - [+] show detail - pre-tRNA
        Distance: -796; Region: promoter
    Flanking Genome Sequence: 12-0584-1 - 5-prime edge 
    GGCAATTGTA GCAAATGCGN CGCCNGGAAA CGGTGGCCGT TAAGGCCGAG 
    GAANAANACG GAGTTTCTCT GGGTACTATG AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15168714 [Map]; Strand: w
      • AT2G36145.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT2G36140.1 - [+] show detail - pre-tRNA
        Distance: -148; Region: promoter
      • AT2G36150.1 - [+] show detail - pre-tRNA
        Distance: -864; Region: promoter
    Flanking Genome Sequence: 12-0584-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    ATTGCCCTCT TCACTTGCCG GGGACTCGCT GCACCATTAG TCGGAAGAAC 
    TTGGAGCAGG CAAGGAATTG AGAGACGGCC AAGGAATCTA GCCGGAGATC 
    GGACGGCTAC TGGAGGTGGA ACGAAGAGCG TCGCTGCGAA AGCCATTTTC 
    CTACTGTCGC GTCCTTCACA TAGTGAGAGA TAGCTTTTTA GAGGATATGA 
    GTTGAAACAT GAAAATCTTG ATGACGTGTT CTTTTTTAAG CCGTTGAATT 
    GATATGAACG AGGCAAATTA CAAAAAGAAA TAGAGAGTGA TTTAACGTAT 
    TTCAATCATT TTTTTCCATC AAAGTAGAGT CAAGACTTAG ACAAAAACCA 
    GTCTACAATA GTATCAAGGG ATCAGTACAC AGAGTTATAG TTCTTCATGT 
    CATAAACGGT TTACTAAATG CTTCTTCTTC TCCTTGACAA AAACTCCTCT 
    GCCCCAATCA ATCGATCACT TTGGTCCTTA NAATCTTCAC TTCATGGATC 
    GGCCTGGAAA TTGAGAATAG AAAAGAGATT CCTTCGATTA GTTGGGGTTT 
    TTCACTCGGN GGTTAATTCT TGTTGATTCC AAATGAATAA TCAACTTTCC 
    TGTCGGTGTT ATCGGNTTGG ACACTACCGA NCCTNTTGAT CACCTNCATG 
    CCTTGGCACA CTCTACCAAT ATTGGGGGGT TTCCTAAAAG TTGCNTANAN 
    ATGTGAAAAN AAAACCCACC ANNCAT

AT2G36140.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Asn (anticodon: GTT)
Link
InterPro Scan - TAIR

AT2G36145.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36150.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Leu (anticodon: TAG)
Link
InterPro Scan - TAIR