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12-0604-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 57749 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -9399; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 956; Region: intergenic
    Flanking Genome Sequence: 12-0604-1 - 5-prime edge 
    TTGCCCCGGT TGTTAGCTTT CCAGGGAATC TAACTAGCCT TCGATCCGAT 
    ATCTCATCCG AGAATTATCT CCATGTTTCT GCAGAGGATG CAATCTCGTT 
    TGACATAGAA TCCTTTCTTA AGAAGACTAG TCATCTTAGG GATCAATTCC 
    CCCACAAGTC TCAACGATTC TCGAAACTAG TAGCACATCT ATGGATTTTC 
    CAGCGAGTCA GGTGTCCCTA GAAGCTGACC TCACTTCCAT CGGAGCTGTC 
    TATCGAATGT TATCCCTGCT TCTATCCAGA AGATGCGATC TTTAGAACTA 
    CGAATCCGTC TGAATAATCC AGCTCACCAC GGGGCCGATT TCCCGACAAA 
    TCACAGGGAA TCTCGTAAGG GTTAATACAT CTACGGATCG CCCAGAGAGT 
    CGTCTTTTCG GAGAAGTTGA CCTCGCCTTA ATCGAAGATA TATGCTGAGA 
    GATATAAACG TTTACCTCAA GCAAGTGCAA CCAGTCATGA GACCCAACTC 
    TATAAAACCA GNCNNCTNNN GGATCGNNNN CCTTGAAAAT CCTGANGAAC 
    TANGAGNGAT NTCCTATNTA CNNATNGNCC NNNNAGNNNN TNNNNAANAA 
    NCCNACC

AT2G01034.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT2G01037.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 5.0e-229 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR