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12-0665-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 784747 [Map]; Strand: w
      • AT4G01820.1 - [+] show detail - P-glycoprotein 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-0665-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTTATACTAG AAGCTATGGG TGAGAAGGTA AAGAAACAAA AACAGCAAAA 
    AAATAAAATG AATAAACTGA AGTTACTAAA GATTTGAAAA TTTCTGCAGG 
    TTGGGAAGTT TATCCAGTTG ATTGCAACAT TCTTGGGTGG ATTTGTTTTA 
    GCGTTTGTGA AAGGATGGTT ACTTTACACT TGTTATGTTA GTTTCAATTC 
    CTCTTCTAGC TATAGCTGGT GCAGCTATGC CGATTATAGT TACTAGAGCT 
    TCTTCTCGTG AACAAGCTGC TTATGCAAAA GCATCAACTG TTGTTGAACA 
    AACTTTCGGG TCTATTCGAA CCGTAAACAT GCTTTATTCT CAAAGCT

AT4G01820.1

Model type
Protein coding
Short Description
P-glycoprotein 3
Curator Summary
member of MDR subfamily
Computational Description
P-glycoprotein 3 (PGP3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 5 (TAIR:AT4G01830.1); Has 830190 Blast hits to 386538 proteins in 4151 species: Archae - 14649; Bacteria - 648558; Metazoa - 17709; Fungi - 12207; Plants - 9512; Viruses - 34; Other Eukaryotes - 127521 (source: NCBI BLink).
Link
InterPro Scan - TAIR