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12-0673-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3299484 [Map]; Strand: w
      • AT3G10550.1 - [+] show detail - Myotubularin-like phosphatases II superfamily
        Distance: -962; Region: promoter
      • AT3G10560.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: -409; Region: promoter
    Flanking Genome Sequence: 12-0673-3 - 5-prime edge 
    TTTCAACCAT TGTAACTGAG TTATGCTCTC GAGCTGATCG GCCAAATCAG 
    CTTTTTAAGC AATCAATCGG TGCGTGGTTT TTGCAGTAAC ATTATAAGAA 
    ACCGTTTCCA TATAATGCTT GAGCCCATTC TCAATTTCCA TCAGATTATA 
    TAACGTCTAA CTGTTTCTAA GTAATGATTT TATACTCCAT ATAACATATA 
    ACCGATTGCT ATAGCATGCT GTATACACGT CTAATATGAT TATTATACAT 
    GTAAATAAAT GAAACTATAT CGCAAATAGA AATGGTAAGC AATAATGCGA 
    AGGCGTTAAA AAGATAATTA TACGAAGAAA TAGGAAAACA AACATCAAAT 
    TAAGATTTAC AAGTCAAGTA ACGACCGTTA CGGCTTTATA ACATTGACGA 
    TTAACCTAAC AAAAATTATT TGCCTACTAC AAAAATATTT CAGTCTTATA 
    ATTATAAAGC T

AT3G10550.1

Model type
Protein coding
Short Description
Myotubularin-like phosphatases II superfamily
Curator Summary
Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P.
Computational Description
Myotubularin-like phosphatases II superfamily; FUNCTIONS IN: phosphatidylinositol-3-phosphatase activity, phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Myotubularin phosphatase (InterPro:IPR017906), GRAM (InterPro:IPR004182), Myotubularin-related (InterPro:IPR010569); BEST Arabidopsis thaliana protein match is: Myotubularin-like phosphatases II superfamily (TAIR:AT5G04540.1); Has 1697 Blast hits to 1550 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 1273; Fungi - 128; Plants - 40; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10560.1

Model type
Protein coding
Short Description
Cytochrome P450 superfamily protein
Curator Summary
member of CYP77A
Computational Description
UNFERTILIZED EMBRYO SAC 9 (UNE9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: double fertilization forming a zygote and endosperm, pollen tube development; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, embryo, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 33598 Blast hits to 33350 proteins in 1733 species: Archae - 49; Bacteria - 4240; Metazoa - 11965; Fungi - 6662; Plants - 9437; Viruses - 6; Other Eukaryotes - 1239 (source: NCBI BLink).
Link
InterPro Scan - TAIR