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12-0726-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23489594 [Map]; Strand: c
      • AT1G63320.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -64; Region: promoter
      • AT1G63330.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -246; Region: promoter
    Flanking Genome Sequence: 12-0726-1 - 3-prime edge
    ACTGAGACTG AGATTGAGAG TGTGAGATTA AGAAGGAACT CAGTAAGCTG 
    AAGCCAAAAT CGAGACGATG CAGAGATCGA TTTCGATGGT ATTTTCATCC
    ACGGCGAAGA GATTGTCTGT TCGTCGGAAT CTCCTGGGGA AAGGTAAAAC
    TTGCTCCTTA CTCCTTCAAT CTTTACGGTT TCTGTTGCTG GGGACGAGCT
    TTTTCTGGTG GCAGTGGTGA TTACAGAGAG AACTTGAGTA GAAAAGTGTT
    ACAGGATTTG AAGTTAGATG ATGCGATTGG TTTGTTCGGT GACATGGTCA
    AGTCTCGTCC ATTTCCTTCC ATTGTTGAGT TCAGTAAACT GTTGAGTGCC
    ATTGCTAAGA TGAACAAGTT TGAACTTGTC ATCTCTCTCG GCGAGCAGAT
    GCAAACTTTG GGAATTTCAC ATGATCTCTA TACTTATAAT ATTTTCATCA
    ACTGTTTCTG TCGACGCCCT CAGCTCTCTC TTGCTTTAGC TGTTCTTGCC
    AAGATGATGA AACTCGGCTA TGAGCCCGAT ATTGTCACGC TTAACTCGCT
    GCTCAATGGT TTCTGTCACG GGAATAGGAT TTCANATGCC GTANCTTTGG
    TTGACCAAAT GGTGGAAATG GGATATCAAC CTGATACCGT CACATTTAAC
    ACTCTAANCC ATGGGCTTTT TCNCCNCANA AANNTCNNNN CNNGGCCNNN
    NACCNCNCTN NCNNTN

AT1G63320.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G63080.1); Has 41413 Blast hits to 11056 proteins in 262 species: Archae - 6; Bacteria - 23; Metazoa - 203; Fungi - 327; Plants - 39906; Viruses - 0; Other Eukaryotes - 948 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G63330.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G62590.1); Has 64592 Blast hits to 15428 proteins in 305 species: Archae - 4; Bacteria - 72; Metazoa - 1099; Fungi - 1181; Plants - 59820; Viruses - 0; Other Eukaryotes - 2416 (source: NCBI BLink).
Link
InterPro Scan - TAIR