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12-0754-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22671157 [Map]; Strand: w
      • AT1G61440.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0754-1 - 5-prime edge 
    TTACCTAGCT CAGAATGTGC AAGACGAATG GAAAGAATTT CTCCTCCTGC 
    AGAAAATTGC ATTGTGTCCA TTAGGTCTTT GCTCCACATT AAGCACCCTA 
    TTCCAGGAAT ATAAGCGAAG GCCAAGCAAG AACAATTGTG GAGGCAACTT 
    TGGTAGCATC CTTCAGCATC CACAGAATTT GCATATTCAT AAAAGTCTGG 
    AGGCTTTATG TTTGGAACAG TATGGAAGAC GTTTGCATCT TTGCCAGTAG 
    AGTTTCCTTG ACAATGTAGT TCGGTACGCC TCGCACAACC ACTTGTCCAG 
    TTTCCTCTTT TCCATTCCTC AATGGATTTA GGAACAAAAC CTTTGAAGCA 
    TTTACACTTT GGAGGATCTG AGATAACACA AAAACCAAAA GGCCCACATA 
    CGCCGTAAAT ATCACATGAA TTGGCTGGAC CCTCGTAGCT TGATTTCCAG 
    TCCAATCCAT TATACCGTAA CACCTTCATT GATCCCTCTG ATGTTAACAT 
    TATACGTGAA AGTTTGTAGT CTCTTTCAAA ATACNAAAAG AATCCTGACC 
    CATTTACATC CTGATGTAGG CTGAATGGAC TANTATATGA TTCATCCATC 
    TGNGGTNTCC CGGNNTACCT TGTTTTANCC CATGGACCNG GNTNTATAAT 
    AAGGGGGNNG AGCCTNNNNT ANAAANCNNN NNANGGNNNT NGNNNGNGAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23375308 [Map]; Strand: c
      • AT1G63040.1 - [+] show detail - pseudogene, DRE binding protein, similar to GI:3738224 from (Arabidopsis thal...
        Distance: 3235; Region: intergenic
      • AT1G63050.1 - [+] show detail - MBOAT (membrane bound O-acyl transferase) family protein
        Distance: 576; Region: intergenic
    Flanking Genome Sequence: 12-0754-1 - 3-prime edge 
    CNNNCNANNG TNGCGNTCGN CATCACGGGN CCGGTNTCTN NCNTCNNGNA 
    TNCNCAAAGG ATTAACTAAC TTTTTANCCN TCNNNAGAGC TTNTTCNTCA 
    ANTANNTCTT TCACANGAGT NTCTAGGCAC GNNNACGNTN TCNATTCTGT 
    NCTCAGNAAT AGAGAAAGAG TCNGANACNG TTTNTTGGCT TGAGAGNCNC 
    NCAGATNNNG CCTTTNCNCG NNTCNNNNTN TTANGGGCCT NGNNCNTNNT 
    NNATANNTNN NANNTTNCCT GGGCNNCTNA CCTTATNATN NCATTGATTA 
    AAATAATATT GTTGAGAAAC CCATACAGTA TTAGATTGAT GGAGATGTCT 
    TATTTTCTCC TAAAGCATCT GTTTAGTACC CTAATCACTC TTTTCGAGAT 
    CCGGATTTCC CTAAATCGAT ATCATGTCTC CTAAATGTAG TCTTAAGATG 
    ATAATATTAT TAATTTCCCA TAAAATGTCT ACAGCGATCC TTTCTTATGG 
    CTTTAGATTA AACAAAGAAC AACACTGTGC TGGAGAAGAA TCTTGTTTTG 
    TCACACTTGT TGTTCTGTTA AAAGAAATTC AGATTCGAAT AAACTTGACC 
    TCTTTCAACC AAAAAATATA TGAACTTTTT AATCCTTTTT GTTCATTTTC 
    GAGTTGACTT AATTNGGACT AGCTTAGATA TATATCAGAA AAAATAAAAT 
    CATTTTCNNA AAATTGGGAA GAAGAANAAG NATAAAA

AT1G61440.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, ATP binding site (InterPro:IPR017441), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61400.1); Has 123186 Blast hits to 121269 proteins in 4842 species: Archae - 106; Bacteria - 13498; Metazoa - 45919; Fungi - 10210; Plants - 35088; Viruses - 427; Other Eukaryotes - 17938 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G63040.1

Model type
Pseudogene
Curator Summary
a pseudogene member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The translated product contains one AP2 domain. There are 17 members in this subfamily including TINY.
Computational Description
pseudogene, DRE binding protein, similar to GI:3738224 from (Arabidopsis thaliana) (Plant Cell 10 (8), 1391-1406 (1998)); blastp match of 38% identity and 3.9e-24 P-value to GP|18535580|gb|AAK57551.1||AY034473 putative transcriptional activator CBF1 {Lycopersicon esculentum}
Link
InterPro Scan - TAIR

AT1G63050.1

Model type
Protein coding
Short Description
MBOAT (membrane bound O-acyl transferase) family protein
Computational Description
MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G12640.1); Has 1074 Blast hits to 1071 proteins in 250 species: Archae - 0; Bacteria - 147; Metazoa - 624; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR