1. Home
  2. Mutant Lines
  3. 12-0760-1

12-0760-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 90657 [Map]; Strand: c
      • AT2G01130.1 - [+] show detail - DEA(D/H)-box RNA helicase family protein
        Distance: 0; Region: intron14 (CDS)
    Flanking Genome Sequence: 12-0760-1 - 5-prime edge 
    GTTGCAGGCT GGCCTGAGNG TGAGAGATCC TTNCTTGACA CCTCAGGACA 
    AGAAAGATGT AAGTCCTTNT CCCACCATGT NTAAGANAAA ATGCANNNNA 
    ACGTCTTATC TANCACTTTA TAGACTTATA GTTATACCAT TTATTGGTCT 
    CTTGTTATAC CCGTGCAAGC CCCTTCTTCC ACTAAACTTT AACACATNAT 
    GTCTCTNTNT TATTGAAGGN GACTTGACCG TCCATCTTCT TNTCTGAAAA 
    TACTTTTATT ATGGACGTAG TTTTCCCAAA AAGATCTTGT CTTGAAATCA 
    NATGGGATGA AGNGNNGGGA ATTANNANNN N

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 90772 [Map]; Strand: c
      • AT2G01130.1 - [+] show detail - DEA(D/H)-box RNA helicase family protein
        Distance: 0; Region: exon14 (CDS)
    Flanking Genome Sequence: 12-0760-1 - 3-prime edge 
    GCCGCAACAG TCAATATGGG ATCAAGGCAA CCAAGAATAG CTCCTAGTAT 
    GAGCATTTTT CCAAGCT

AT2G01130.1

Model type
Protein coding
Short Description
DEA(D/H)-box RNA helicase family protein
Computational Description
DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink).
Link
InterPro Scan - TAIR