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12-0774-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 89036 [Map]; Strand: w
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -1000; Region: promoter
    Flanking Genome Sequence: 12-0774-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TACATGGTCA TATGTAATAA ATCTAGTTGT TTTGGAAATT 
    GCATATTCTC TCCCTCCCTC TTTATCAATT TTACATATAT GTAGCATCAG 
    CAATATATGT GAATTTGTTA CATTAGTAGT TTAGTTTGTA TTTTAATTTT 
    TTGGATAAAT TATGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 89027 [Map]; Strand: w
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -2132; Region: intergenic
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -1009; Region: intergenic
    Flanking Genome Sequence: 12-0774-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGC 
    CGGTAATGAT TATATGCAAA AACTCGTATT TATTGACGGT ATTAATAAGT 
    TGATGTACGC AATCTATATT TGGGTCAGGG AATCATGTTT ACTCAATATT 
    CGATTAAGGT ACAAATAAGG AAACTCCAAC TAGTGCATAT ATTTCACAAA 
    TATTTGAACT TTCCGAAATT ACAAGATCTA TGTAATGTAT AGTCTAGTCA 
    GTGCGGATCT CCAATATATT ATTACACGAT AAATGAGTTT AAAATTTGGT 
    GACGGCAAGA ATGATCAAAT ACACGTGTGT ACGTGTGCGT GTATAATATA 
    CATATCTCAC ATCATTGATT CAAAAAAGAA AAGAGTGACG ATTACGACGG 
    TCCAATAATA ATCACCAAAT GAGTAAAGCT AAGTTGGTTT AGAAGAAGAA 
    CCGGTGATCA AAACATAAAA GAAAGAAACC GGGATTGGAT TTGAGAGAAC 
    CGGAAAAATT GGCACGTATA TATGATCGCC ATGTGTCGAA TGTGACTTTT 
    ATGAAGAACG TAACCGTTCT GACGCAACCA ATGGCTCGTT TGCGAGTGCA 
    TATGGTATAC AAGTAACGCT CCCATTTCAT TTCTTATGTT ATTATTACTT 
    GATTAATTAT GAACAGGGAA AACTAATTAA TTACATTACT TAGGAGATTA 
    ACAAATAGAT TANAANAAAC GGTNACAGTT GTTGACAGAN GTNACCGTGC 
    CGNCCGGCTC TTGTCCAATC TTTGTTTG

AT4G00210.1

Model type
Protein coding
Short Description
LOB domain-containing protein 31
Computational Description
LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00220.1

Model type
Protein coding
Short Description
Lateral organ boundaries (LOB) domain family protein
Curator Summary
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description
JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR