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Mutant Lines
12-0820-1

12-0820-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 2; Position: 19573680 [Map]; Strand: w
- AT2G47790.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -653; Region: promoter

GNNCNNNNAN NGCGNAGGAC NAGGNNAATN GGANNCCGAA CGCAGNTATT 
ANNATGCNGN GGANCGNCAA CGNAATNGGN NCAANGATGG GATCACCAGT 
CCCNGNCCNT CNACNATNCN TGNCNTANAC ACAGTTTTAT TTCACACAAT 
ACAACAAGCA CNTTTATATT ATATATGAGA GTGATAGAAT TTTATCATTC 
CATATTTCCA TGATANNAAG GATTCCAATA ATTGGTCCAA TTTTTCTAAT 
AGACTTTTCT TATTCTAATA GACTCTTCTT ATTCATCTTT CTTAATCAAT 
TCGACCAACT CAGTGGAAGA CAAATCTCAC ACGACCCTTT CCACTTTTTG 
GTAACCTTAT TATTAATTNA TTAGTATGGN GTAGTTTCTT TCTTCTGCTG 
ATCTTGTCAA CAAAATACTA AACTTTTCCT AAGCGGNTGN TTATATATTA 
TTAACAAAGG TTNNCCGCGT GGCTCTTGGN TAACTTAGTA NACTAANAAC 
NAAATCAGTA AACTCGATTT TCTCAACCAA ATTTAGAAGA NNCTACGGCA 
TGTNAATCAG CTANTNATAN NAGATNCGNA CNNGTCGTTN NACNGGATTN 
GNATTTNGTC TTGCNCAAAA CCAANAATNG NGGCTCTCTT GGCNGNGTTN 
GCTNGACNAN CGCATATNCC ANTATATTTT GNGNACACNG GTAAGGTCNN 
GGATNCTCNA NTGANAANAT TATNNCATNC GGNNCGAGTN NANNNGNANA

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 19694707 [Map]; Strand: c
  - AT2G48160.1 - [+] show detail - Tudor/PWWP/MBT domain-containing protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 12-0820-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCA 
CATCATCTGA TTCAGAATGA CCTGATGATC TTCTGATCCT TTTTTCCCTT 
CTTAATGCTC CGTCTTCCAC GTCATCAATA GTCTGTCCAC CATCGTTGTT 
TTGTAACATG GAGCTTTGAA GCT
```

AT2G47790.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10; Bacteria - 2663; Metazoa - 3454; Fungi - 3073; Plants - 916; Viruses - 0; Other Eukaryotes - 1625 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48160.1

Model type: Protein coding
Short Description: Tudor/PWWP/MBT domain-containing protein
Computational Description: Tudor/PWWP/MBT domain-containing protein; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT3G63070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR