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Mutant Lines
12-0879-1

12-0879-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 10312664 [Map]; Strand: c
- AT3G27810.1 - [+] show detail - myb domain protein 21
  Distance: 2356; Region: intergenic
- AT3G27820.1 - [+] show detail - monodehydroascorbate reductase 4
  Distance: -2450; Region: intergenic

GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCGT GCTTCATGCG TGGAATGCAT GACTTGGGCC 
AAGTTAATAA TCGACCAAAG CCAAAAACAA AGTTGATCTA ACCGGAACCA 
AGTGAATTGT AATGGTAAAG GCATGATAGT TTAATTGAAT GAATATTGCA 
TGAACCGAAA AATATATTAC CCTAGTATAG TGAAATTAAA AACCATATTC 
ACTAAAAAGA ATATTTGCTT ATGTATCTTT AATGGAAGAT CTTCTTTGAT 
TTCAAAGATA GTTACCTGCA CATGATATAA TTTAGTAAGT CGATAGTTAT 
GAAAATCTTC TTAGATATTC GCCGACTTCA ACTGTTCAAC ATTGAATAAA 
GATTATGTCA AACTCATTGA GACGGGAAGA AAATGGTTTT TGCTATATAC 
AGAAAGTACA GCTAAGGCAT GAGGCTATAA CAATGAACAA GCAAATACAC 
AAATAGAGAG AATTTAAAAG AAAAAAAACA ATTCTTTCAC GTTTATTTAC 
ATTTCTAAAT TATAAACCAC TTGTATGTTT GTGACCGACC CGCCATGTGA 
TTTTTCCTTT ATTATTCACA TGTGAAGTCG ACAATTCCCA CATGATAAAA 
ACGTTGGCCT AATCAATTAA ATAAACATGT GGCCCAATTC CACATCCATT 
TCGAATTTAA ATTTGTAGTT GAGAATCTAA AATAAGCATA ATGCGAGTTT 
TCTACTTTTC TACCCAAGAT GTAAAANAAA TATTNTAGTG TAGCATGCAT 
GGGAATTTAA TAAAA

3 prime edge [+] show sequence

Chromosome: 3; Position: 10312721 [Map]; Strand: c
- AT3G27810.1 - [+] show detail - myb domain protein 21
  Distance: 2413; Region: intergenic
- AT3G27820.1 - [+] show detail - monodehydroascorbate reductase 4
  Distance: -2393; Region: intergenic

CTCCGAAGTT CCTTTCCTAT GTTCTCTCTA ATCTTGAACC TGAGGGATTG 
ATTGAGAGTG ACAACTCTTT CGGTTGAGAG CAATAAACTC ATTTGATGAA 
TAAGGTTTTC GACCTTTGCA TCCATTTTTT TTTNCCTTTA ATCNAAAGGG 
TNGNCNATNC AAAACCAANA GNCAAANCTA ANTTNGNAAG TTNANTNCCN 
CCTANTTNAA NCANNGATNT NTNTGTTAAN CCANGGTTAA NAANGTNAAN 
CATAGTTNCT NNCCCTNTTA TGNCTNTTAT NTGTAGNAAT NGATNGANCA 
TTNTTTTNAA TTNTTATNAA AANGTCTNCN GAAAAAATNA AAAGTTTNGG 
CTANTTAAAA ANCTAAACAA AAAAAGTTTT NGGCCNTTTT NTNTNTAAAA 
TTGGCNNTTT NNGNGGTNNC TNACATNAAA GGCNGNNTNG CCCCTNTNTG 
GCCTGANNGN NAGGAAGGCC CNTNTNTNTN GGNNAAAAAC CCCAAAGGTT 
AGGCCATNCA NTNTTTTTNT GTTCTNGAAC CTGATATGGA TCTTCTTGAG 
TTTATTTGCC TCACTNTTCC TGANCCTNTT NTCNTCCCNT TTTTTNNTAC 
AGTNGCTTCA NTTCAAAGCC TAAACAATGG CTTTANCGGG TTTTTNTTAA 
AAAGGATCGG GGGATTNTTN TTTTTTTTTT TTTTTTNNNC CCCAAAAAAA 
ACAANNNGGG GGGGGGGNNN NTNCCNNNNG GGGCCTNNCN NNNNAAANAA 
AAANT

AT3G27810.1

Model type: Protein coding
Short Description: myb domain protein 21
Curator Summary: Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.
Computational Description: myb domain protein 21 (MYB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 24 (TAIR:AT5G40350.1); Has 8792 Blast hits to 8049 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 785; Fungi - 472; Plants - 5782; Viruses - 6; Other Eukaryotes - 1747 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G27820.1

Model type: Protein coding
Short Description: monodehydroascorbate reductase 4
Curator Summary: Encodes a peroxisome membrane-bound monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2
Computational Description: monodehydroascorbate reductase 4 (MDAR4); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: peroxisomal membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 27219 Blast hits to 27159 proteins in 2894 species: Archae - 579; Bacteria - 21951; Metazoa - 737; Fungi - 533; Plants - 600; Viruses - 0; Other Eukaryotes - 2819 (source: NCBI BLink).
Link: InterPro Scan - TAIR