1. Home
  2. Mutant Lines
  3. 12-0897-1

12-0897-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23042264 [Map]; Strand: c
      • AT1G62320.1 - [+] show detail - ERD (early-responsive to dehydration stress) family protein
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 12-0897-1 - 5-prime edge 
    TGATAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCCCTT TTGAGAGTGC GGGTGCATTC TGGCCAGACG 
    TTCATGGACG TATAATATCG GCATTGATCA TCTCACAAAT CCTTTTGTTG 
    GGATTAATGA GCACGAAAGG AAAAGTTCAG TCCACACCTT TCCTCCTCGT 
    TCTAGCGATT CTCACCTTCG GTTTTCATCG GTTTTGCAAA GGCCGGTACG 
    AATCGGCATT CGTCATTAAC CCGTTGCAGG TTAGCTCAAA CCAAGATCGA 
    GCATTTTCGG TTAATGGATG GTAGTTTTAG CTACATTTGT TTTGGTTCAG 
    TTTGTGTTAT TTAATCTTGT GAGTACCGGT TTACAGGAAG CTATGATTAA 
    GGATACATTG GAACGAGCAA GAGAACCAAA CTTGAATCTT AAAGGGTTTC 
    TTCAGAATGC ATATGTTCAT CCTGTTTTTA AAGACGAAGA AGATTCAGAT 
    GAAGAGGGAC TAATCGAGGA TTCAGATGAC GAAGATTGTG TAGTTGTACA 
    AACCAAACGT CAAAGATCAC GGAGAACCAC CGTTGCGAGC AGCAATGCGA 
    GCCGTGGCTC GTCACAATCA ACGCCTTTTA ATCAACTTGA TTTGGGTAAG 
    GGGAAACCGG AGACTTGATG GTCCATGAGT AATTGACTTA ACCGGATTGG 
    TTTGTCTACG TAAAGATCTT TTTTTTTANC TTTCCTTTNG NACCGGGGGG 
    GAAAGGGTTT GGATTTTNGN ANGAAAACAA TGGTTNGNTG GAGTTGANGN 
    AAAAAAAANA NNGGNNAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23042273 [Map]; Strand: c
      • AT1G62320.1 - [+] show detail - ERD (early-responsive to dehydration stress) family protein
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: 12-0897-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATACTTC 
    TGATTGTACA CATTTATGAT CTGCATAGAA ACCAAATGTT ACCTTGTTGT 
    TTGATAGTAA AAGAGAGTTT GTTTCCTTTG TTTTTACCTG ATGACGGAAG 
    ACGAGGTAGG CGAAACCAAA GAAGAAGATG ATGAAAGGAA GAAGAACAGG 
    AGTGACAGGA GCGTAGACAA GGCCAAGGAG GAAGTATAGT TGAATCCGAG 
    GCTCGGTAGC GTAGAAATCA ATCTGTCCCG GATC

AT1G62320.1

Model type
Protein coding
Short Description
ERD (early-responsive to dehydration stress) family protein
Computational Description
ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT1G11960.1); Has 1443 Blast hits to 1265 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 708; Plants - 430; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).
Link
InterPro Scan - TAIR