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Mutant Lines
12-0907-1

12-0907-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 20164118 [Map]; Strand: w
- AT1G54020.2 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -375; Region: promoter
- AT1G54020.3 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -370; Region: promoter
- AT1G54020.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -380; Region: promoter

GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT CAATTGAAAC TAACTAGTTA GTTTCTACAG 
TTCTTCTACC TAGACACAGT TTGTTCTATT TTTAATAAGG TTGAGAAAGA 
TGTTTTTCTT TTTCCTTTTG TCAAAAAGTT GCTGCTCTAG AAAGCAGAAC 
ACACCTTGAG CATTGAGCGA CCAAAAAAAG AAGAAGAAAG ACTTGAGCAA 
TGATTAATGT TTTTTCTCTC ACAGTTTTTA AATTACCCTT AATAATTTTT 
TTTGTTAACC CTTAATAATT AATGTATTCA AGTTTTGTTG AACCAAAACA 
TCATTTATTT TCAAGANATT TTTTTAATAG TCTTTATCTT GTTAAAAATA 
ACTTCTTCTT TTTGTTAAAA ATAATTAAAA GAGCACCAAT GTNTATTCAA 
CTAAACTACA AATCTTAAAA AGTAAAAACT GAATCCTATA CTTTNTAACC 
GAATCTTAAA CATGAATT

3 prime edge [+] show sequence

Chromosome: 1; Position: 20164110 [Map]; Strand: w
- AT1G54020.2 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -367; Region: promoter
- AT1G54020.3 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -362; Region: promoter
- AT1G54020.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -372; Region: promoter

NTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCTTATT 
AAGACATAGC AAAAACGTGA GAGATTGAAT ATTCACGGCG TTGTGGTTTT 
CTTTTGCTAA CAATGATTTT ACATGACATT TTTGCGAAAC GTTTTATTTT 
CTTAAAAAAT TGTGTTACAT AATTGTTTTT TTGTTTGTTC TATAATTACN 
GTAACAGCTC TTAACGTTTA CAATAAATAT ATATTTTCTA ACGTTTATAT 
TTTTATTAGA TATTTTTTCC CCAAACTTTT TTCTTTATTT TAAACTGAGT 
TCGTTTAATC TTTAATTATA GAACATTCTT TTTTTTTNGN CNTCANTTNT 
AAANCANGTT AAAANCNNTT TTNTTNCCAA ATTTTTTNCA NTNTAAATTT 
TTTANNGGNC CGNGGANCTT NTNGGCCCNN ATNATTCTTC CTTNNGGTNA 
ACNGAAAANG GNGGGTNGTN CAGGGNGGGT CCTAGGAATN TTNCGGGTTT 
TNCCTNTCCT TNANAACCTN GTNNCCATNT CCGGGCANAA TNTTCCGGNG 
GGGGGTTTGT TCACTTNCGG AAATNCCACC TTCAACCCTG GAAATAAAAA 
GTNCCCCNCA AGGGCTCCAC TTCCTCAAAA CTTTNGGCCT TNCNGGAAAT 
CTCGANATNA CCCTAAGGGC AAGTTTTNGG ANGGCAAAAT TGNCCCGNNC 
TTTNTTGGGA AANNTNGGAA ATTNNTCCNT TTTTNANCNT TTNAATTTTT 
TNNAAANGGA ACAAAATGGT TTATNTTTCC TTTTNANCCC AGGGNAANTT 
TNGNGNNCNC NNNTGGGGGG GGNGN

AT1G54020.1

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 2776 Blast hits to 2750 proteins in 64 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 2758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G54020.2

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 3048 Blast hits to 3018 proteins in 88 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 2; Plants - 2967; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G54020.3

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 2776 Blast hits to 2750 proteins in 64 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 2758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR