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12-0973-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 96095 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-0973-1 - 5-prime edge 
    GGAGANANGN TNNTGNNTAA GATTTACCAC TAGGANAANG GCTNATGTNN 
    GNAATANANG CTACCAGCCN NGGCCNNCGA NNAGCNCNTG CCNTANANTG 
    AGTGGCANNC NCCNNCTNAG AGGANAACNC NNTANNAGNN CACCANGGAC 
    GGGAAGACCT TTGTCGATTG CTTGCGCGAT GCCAACATCG TCCCTGGCAT 
    CAAAGTTGAC AAGGTATTTT TTATCCATTT ATTCTGTCAT CATCATCATA 
    AGTAGTTGAG TTTTTATGTG TGTTAAGTGA AGTGTTGACA ATGCAATCCA 
    CCGTGTAGGG CTTGTCTCCC CTAGCCGGTT CCAACGAAGA GTCTTGGTGC 
    CAAGGCTTGG ATGGATTGGC CTCACGCTCT GCTGAGTACT ACAAGCAAGG 
    CGCTCGTTTT GCCAAGTGGT ATGTCATATA TTNCACCATG TTATCTTACA 
    TATGGTATTA ACTCTTTGGT TNGATGTGAA AATGCTCTTC CTAGTTTTGA 
    TGTTGACTCT TTGGAATATA TGTATGTGTG NGTNTGCTAG GAGGACAGNG 
    GAGAGTGTTC CCTGCGGNCC TTCAGCACTG GNTGTGAAGG AAGCTGCGTG 
    GGGGCTGGCT CGCTATGCAG ACATCTCTCA GGATAATGGN CTTGNCCCCA 
    TTGNGGAGCC ANANAACCNT CTGGACGGGG ACCNCCCAAT ANAAGAGGAC 
    TCTGGANGNG GCNNANAAAA GGGNGGCNAA AGGTGNNCNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25392261 [Map]; Strand: c
      • AT5G63390.1 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0973-1 - 3-prime edge 
    GTCATATTCC CGGAATGTCC TCCTNTCGCC GGTAACGGAA ACAACGTGGA 
    AGCTCCGGAT ACAGCAAGGG AGGTTAAGAT C

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G63390.1

Model type
Protein coding
Short Description
O-fucosyltransferase family protein
Computational Description
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G44500.1); Has 826 Blast hits to 816 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR