1. Home
  2. Mutant Lines
  3. 12-1022-1

12-1022-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23372056 [Map]; Strand: c
      • AT1G63040.1 - [+] show detail - pseudogene, DRE binding protein, similar to GI:3738224 from (Arabidopsis thal...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 12-1022-1 - 5-prime edge 
    CTCGCATAAC GTGAACAAAG GATCCAACAA GATATTAAAC AGATATCAAT 
    CCATCAATAG CTCCACAAGC TCTCTCCATC AGAATTCTCC GGCGAATCAT 
    CTAACGGAGG AGATCCCATC CATGGCGGAG CCACCATCAT CCCTTTGGCC 
    ATCTCCGCTA GCAAACTAGG CATGTTTAAT AGCTCTTCTT CATCCACAAA 
    CACCGTAGTT GAAGATCCCG CCGTATCACA AACTTTCTCT TCCTTCTTTT 
    CACCTACCTT TACGGCCGCT CCAGCCGCAC CCCTAGCGGC AGCAGCCGTG 
    GCTGCAGCGC ATCTGATATG AGCTGCGGAA GAGGAAAGGG GAACGGGGTA 
    AGATCCCAGG GAATCTGGGA AGTTCAAGAG AGTGTCTCCA CCTTTAAGAG 
    CTAACGCCGC CACGTCATAG GCGGCAGCAG CCATCTCCGC CGTCGGATAA 
    GTCCCAAGCC AGACACGTGT AGGCTTCTTA GGCTCTCGGA TTTCAGACAC 
    CCATTTTCCA CTCCGACAAC GGATTCCACG GTAAACCGGA TTCTTTTTCG 
    GGCGAGAGAT GTCGGTGTCA GTGGCCATTA AAGTATTAAT ATCATTACCA 
    CTTGTAGTAG AAGAAGGAGC CGCAAAACAA ACAGTAGTAG TGATAGTATC 
    AAGTGGACAA TGGTTTTCAC ACGTGGCAGA GTCAGAGAGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23372173 [Map]; Strand: c
      • AT1G63040.1 - [+] show detail - pseudogene, DRE binding protein, similar to GI:3738224 from (Arabidopsis thal...
        Distance: 100; Region: intergenic
      • AT1G63050.1 - [+] show detail - MBOAT (membrane bound O-acyl transferase) family protein
        Distance: 3711; Region: intergenic
    Flanking Genome Sequence: 12-1022-1 - 3-prime edge 
    TATGCGAGTC ATCTTTGTTT CTTTATCCTA TGATTGTTTG AGATGATTTG 
    TTAAATAATC GTATGATTTT CACTTTTTAT AATTCAAGAA GAGAGATC

AT1G63040.1

Model type
Pseudogene
Curator Summary
a pseudogene member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The translated product contains one AP2 domain. There are 17 members in this subfamily including TINY.
Computational Description
pseudogene, DRE binding protein, similar to GI:3738224 from (Arabidopsis thaliana) (Plant Cell 10 (8), 1391-1406 (1998)); blastp match of 38% identity and 3.9e-24 P-value to GP|18535580|gb|AAK57551.1||AY034473 putative transcriptional activator CBF1 {Lycopersicon esculentum}
Link
InterPro Scan - TAIR

AT1G63050.1

Model type
Protein coding
Short Description
MBOAT (membrane bound O-acyl transferase) family protein
Computational Description
MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G12640.1); Has 1074 Blast hits to 1071 proteins in 250 species: Archae - 0; Bacteria - 147; Metazoa - 624; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR