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12-1032-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22335837 [Map]; Strand: c
      • AT3G60420.2 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT3G60420.3 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: -176; Region: promoter
    Flanking Genome Sequence: 12-1032-1 - 5-prime edge 
    CTTATAGCAA TGGTAATTTA AATACGTTCT GACAAATTCT TGTTGAACAA 
    CAATTTTGTG TTAGAAAAAT TACAACCCTT TAGCTTTACA TATTTTTGTA 
    AAATTTGTGG AAGAAAAGGA AAATAACCTG AACCATTATT CTTATATATT 
    TTTTTTTATT GAAGCAACCC GTTAAACCAG ATATTCACAT ATAAACCGGT 
    TAAAGGGGAN ATTGGCGGNN TTACAACTAC ATGATCATGG ACTGGGATTT 
    TGGTGTACTT ATAANATACT CCATGACTAN TAACTACCTC AAATTNACCA 
    TACCCATNAC CATNCAAAAT CTGCCTNNTN ATTGGAACAC TACCAACCCG 
    GGCCGNTTAN CANGCTTGCC CTNTTTNNNG NGGCAGGNAG NCAAANAAAN 
    AANANGTAAA ANNANATNTN NNAAATAANN NNAAAAAANN NTNNGNNAGC 
    TCTANTTNNN CTNNCGTNNT NNTNNGTTGC TNGNNANAGN NNTNANNTCT 
    GNCNNNANTT AGCCCNNNAG ANNGGNTGAA NNNCGTNTAG ATANNNNANG 
    GNGAAGNGNA NNTGNNNAAN NTNNGGNNGT NATNTNTNNC GNTCNGNTNN 
    NGCTNTANCN CAANNTCNNC NNGCNNNANG TNGNNAGANT ANCTNANAGA 
    NNNATNNNNN AGANGANTTC NNTACANATC TNACAGNNCA TACNGANAGA 
    GNNNTNNACT ATCAGNNGGA AACTATAGAA N

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22335953 [Map]; Strand: c
      • AT3G60420.2 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: intron4 (CDS)
      • AT3G60420.3 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: -60; Region: promoter
    Flanking Genome Sequence: 12-1032-1 - 3-prime edge 
    GCTATAAGCA AGAGAACAGT CTTAGCAAAC TGCTGAAACG ACAAAAAAAA 
    TTGTTCTTTA GTATTCAAAA AAAAACTTTG AACTATACGT AGTCTTCCTC 
    ATGTCTGATG CCTATTGACG AGTTTATTAC AATAGTAAAA AACAAATGAA 
    AATACAATAA AAAGTCAATG GTCTTCTTAA TTGCATGTAA TATACTATAC 
    TTGCATCACN CCATGAAGCA GCAAGAAACA GAGGAAATGA AGTCTAAATC 
    AAACATGGAT GGCCACCAAC ATGTTTTCAT GATGCGCCAT GGCGATCGCA 
    TTGATAAGTT TGAGCCACAA TGGGTCTCGA CTGCTGCTCG GCCTTGGGAT 
    C

AT3G60420.2

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60420.3

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60440.1).
Link
InterPro Scan - TAIR