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12-1049-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27207794 [Map]; Strand: w
      • AT1G72270.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR0...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-1049-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTG CATCCCTCTA GCGATCAACG ACTGGCTAAA 
    TGGTCGGGGG CATATGCATT TCATGATAGT ATGGACCTCT GAACCACCAG 
    AAGGAGGTTT ATCTGGGTTG AGAAAGTCAA AAGAAGATGA CATTCTTACA 
    GACGATACCA AATCTGCTGC CAGGGAAATA GATGAAAACC TGCAAAGACT 
    TGAGTTACTA TCCAGAAAAA AAAGAATGAA AAATAACACT CTTGTACTCT 
    GACGAGGACT AACCAGTAAG GTGATGTAAA ATCTTCCACA TTGTATGGAA 
    ATTCATCAAA GAAAGCAGAA GCTAAAGACG GTCTACCCCT AATAATGGCT 
    AAAAGCAAAT CCCTGGGATA ACCAGTTTCT GTAGCTTTCA AGCTCTTCAT 
    GAGGGCAAGT AGTCGTTTTA TATTGCCTTT TCTGTATGCA TCTGGCATCA 
    ATCCATTANA GGGGTCTGTA CAAACTTTAA CAAGAACATC ATAGGCCAAC 
    TCATTCACAA TCCCACCATC CTCTCTTTCT GAAATGATGA CTAGCTGCTC 
    TAGNGTTTTG GGGTCCAAAG AGAGCACTCN TAAGCCGAGG ACTAAGCGAT 
    GATTCTTGAA CAAGGATCTT GTCTTTCAAG GTAGACAAGA CAGAAGCCCA 
    GAGTGTCNTC ATCGNCTTCC TCAAGGCCTT GTAGGAGTTG ANAATAAAGT 
    GCTTCTTCTC TAANATAACT TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27207781 [Map]; Strand: w
      • AT1G72270.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR0...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-1049-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCT 
    GTTTTCCTTG TGAAACATGG GACTTTGAGA TTTCTCTGGG AGACGCTGAG 
    GCTGTGGGAT TCTTTTGTTA CTGCTTGGAA ACTTTGCTCT GTTGACCAAA 
    TTCAGGCTTC TCTTGAGCGG GATATCATAG GTGAGGTGAT AAGTTTTTTC 
    CCAGATTTCC AGGTGTTATG GACCGTACTA AAGGTGTCTC AAAAGCTATC 
    TTTGAAGAGA AAAGCAGAGT TGGATATTGG ATTAGTAGAT AGAAAAAAGC 
    GTTTAAAGAC ATCTGAGATG GCTGTTTTGG AAGAATTGGC TAGTGATATG 
    GTCATTGGTG GGCTAGGTTC TGATACAAAT ATCTTTTTGG AAGAGGATAC 
    TGGGGATGCT CAGTTGACAG ATCAGGAAGA TGCTGAAAAC GAATATCTTG 
    GGATCGTTTC ANAAATTTGG GGTTCAGAGT TTTGTTCTAA GCCTATCGCT 
    TCGGTCGATG AAGCANAGAT GTTCTTTCAG ATAAAGCTCC TGGATACCCT 
    CGGGATTTAT GTGGTACGTT GATCTGTCAT ATTATTAATT TTTGTTGTGN 
    TGGTTGTAAT AGATNACNTT NNGGTTGNGN TTAGTAATAA CNAATAACAG 
    GGTTGTNNTA TTGNTTAAAC CCCTCCGTGG NCNAANTCTN NANTTTNGTT 
    TTCNAGGAAC GGGTTTNNTT TACTANCNAN TANCTTNGGG NAATTNGNNN 
    AACTTTATTT NTATTAGCGG NAAANNNG

AT1G72270.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR