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12-1106-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 63477 [Map]; Strand: w
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 12-1106-1 - 3-prime edge 
    GTCCAGACCC ATTAAACGGA GACAAAAAAA CACAAACGAA ACAAAGAAAC 
    TTACCCTTGT TCCATTGTCG GTGAAATCCT TCAGGCTTAT GTTTTTCCAG 
    TGCTAAAATC GCATTTCAAC AAAACTGAAT CCCTAATGAC TATTCGCATT 
    TCAACGAGTA GAAGAATGTG ATAAGACTAG GGCTTCTCAT TCAATATCTC 
    GGTTTTGTTT AAATTCGAAC CGAATCCGAT CGGTTTACTT ATTAATACCA 
    AAATGTTAAC CATCTCTAAG AAGTAAACCC CTAAATGACC TAATCCGATG 
    AATGACCTAA TCCGATGATC GACCTAGTTC CCGATGTACT TGAAGATTCT 
    CTGTTGCCTT TTACTCACAA TATTATGCAT AACCCTATTA CAAAGATGAT 
    CAGTGTTTAC ATACAACTAT AAACTTTTTC ATTCTCATTT AGTCTCATTG 
    TATCACCATT CATGAATT

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR