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12-1217-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 138446 [Map]; Strand: c
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -640; Region: promoter
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -640; Region: promoter
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -643; Region: promoter
      • AT2G01270.1 - [+] show detail - quiescin-sulfhydryl oxidase 2
        Distance: -885; Region: promoter
    Flanking Genome Sequence: 12-1217-1 - 5-prime edge
    ANAGNNTNAG TACNGNGNAN GGATANGTAT AGNNAACAGG ACCNGGCTNN 
    TNANANNANG CNAANCACNT NNCNNGNCNG GNTGANANNA CGNGGCGACT
    TANATACACT GAGATANNTA TGTGGATGAN ACTGTNTATG TCAGTTGNCA
    ATGAATGATG AATGTNNNGG GNGTACATGC ATCANNCGAA TNTTNAATGG
    TAGTATAGCT NTNGATTACT CTTGAACATT GTGAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7433702 [Map]; Strand: c
      • AT1G21240.1 - [+] show detail - wall associated kinase 3
        Distance: -601; Region: promoter
    Flanking Genome Sequence: 12-1217-1 - 3-prime edge
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATTA 
    GAAAGACAAG TTCTTCTCTT TATTGTTATG TTGACGATCA AACCAATTGT
    GATACAAAGT CTGATTCTCT TTCTCTGTTC TTAACTCTGT TCTGTTTCTA
    GAAGGAGATT CAGTTTCTAA CAAAGTGGTG GATTTGCATG GAAATTTCTC
    ATAGATAACC TCTTGAAGAG TAAGCAGCGA CATGACACAT GAGGCAAGAA
    CTATTCAAAT TCTTCGAAAA CTTGTTGACA TTTATAAACT CAACACACAC
    ACACACACAA AAAAACTACA TATTTCTACT ATTACGACAG CAGAAGAAAA
    CAGAGCATGT TGTGATCATG ATGAGTCTTA TTCCTACATT GTCACTATAA
    CGAGACTTTC ATATATGAAC AATAAATTGG AGTTTCCTGG AAAAATCAAG
    ACAAGAAAGA ANGGACAGAT AAAGAAGTTG ACGCATTTAT ATTTTTCTAA
    CGTCTAGTAG TCTGAATCTT TACTTTTCTT CACATTTGAT TATTCAACAN
    TGTCAAATCA GGGGTTACTT TTCAAGCTAT AAGAAGCGAA TAAGCGATGA
    GAGAAAACTC AAAGAGAAAC AAGTTTAGAG AGAAAGAAAG AGANNGGTAG
    AAGATGAAGT TCCAGGAGGG TGTGTTCTTG GNGGTTATTT TCTTCCTTGC
    ATATACTCAG CTTGNGAAGG GGCAACATCA ACCTCGCGAA GATTGNAAAC
    TTAANTGTGG AAACGTCACA ATAGAGNNCC CCTTTTGGTT TTCTACA

AT1G21240.1

Model type
Protein coding
Short Description
wall associated kinase 3
Curator Summary
encodes a wall-associated kinase
Computational Description
wall associated kinase 3 (WAK3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137245 Blast hits to 122966 proteins in 4824 species: Archae - 125; Bacteria - 13959; Metazoa - 61902; Fungi - 9553; Plants - 33418; Viruses - 443; Other Eukaryotes - 17845 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01270.1

Model type
Protein coding
Short Description
quiescin-sulfhydryl oxidase 2
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.
Computational Description
quiescin-sulfhydryl oxidase 2 (QSOX2); FUNCTIONS IN: thiol oxidase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 1 (TAIR:AT1G15020.1); Has 2833 Blast hits to 2194 proteins in 312 species: Archae - 22; Bacteria - 32; Metazoa - 1533; Fungi - 396; Plants - 476; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR