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12-1223-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26468654 [Map]; Strand: w
      • AT1G70280.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G70280.2 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-1223-1 - 3-prime edge 
    ACTGAGACAC TGTCTTCACT CTTTTTTGCT TATCAACAAA CTCTGCACAA 
    ATCTTAACCT CTCTGTTTCT TCTCTTTAAT TCTCTCTTTC ATCGAAAGAA 
    ACCTCAAATT TCAAATCTTC GCATTGTCCG CCATTCTTAT ACTTCCCCTA 
    GAGAAGCT

AT1G70280.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G23880.1); Has 7288 Blast hits to 4121 proteins in 430 species: Archae - 61; Bacteria - 1521; Metazoa - 1473; Fungi - 465; Plants - 266; Viruses - 2; Other Eukaryotes - 3500 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70280.2

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G23880.1); Has 7202 Blast hits to 4120 proteins in 426 species: Archae - 63; Bacteria - 1459; Metazoa - 1476; Fungi - 468; Plants - 264; Viruses - 2; Other Eukaryotes - 3470 (source: NCBI BLink).
Link
InterPro Scan - TAIR