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12-1232-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23221566 [Map]; Strand: w
      • AT1G62700.1 - [+] show detail - Arabidopsis NAC domain containing protein 26
        Distance: -3650; Region: intergenic
      • AT1G62710.1 - [+] show detail - beta vacuolar processing enzyme
        Distance: 2308; Region: intergenic
    Flanking Genome Sequence: 12-1232-1 - 5-prime edge 
    AATCTACTAT TACAACGGAA ATGAATACAA TTGTTAGTAA AGTTTGATAT 
    GACAATTTTA TGTTCTTTTT GTGAAAAGAA AAACATATGT CTAAGTTTTA 
    TGTTGAGTTC CTATTGGCCA CCTAACGTAA GTGGAACATA TAAAACTTTA 
    GAACAATAAG ACTTTATTTT GTCTTATTTT AAAGTAAGCG CTTATTTCGT 
    AAATAACCAA ATGCATAGTT GAAATTGGCA AAACCAAAAT TGTTTCAAAT 
    ATCATTCTAA ATTATGAAAT ATTGTGTTTG TGTTTCATTC ATACAACATA 
    TTGTGTATAT TCTATTAAAA TTCATAGCTG AATAACATCA TAGATTATTT 
    TCTCAGATAC ATGTTTGTTC TTCCCATTTT CTCTTTCACT TATAATTTAT 
    AATTATGCAT TATAGTTAAA AGAAAATGTT AAAAATCATT TCATACTGAA 
    ATTGCACGTT ACCATTATGA ATATGATAGT ATAATAGATA TACCTAAACA 
    GATACACTGA TATTCTATAG TGTATTCTAG AAGAAGAATT TCCAGATATA 
    CCTAAAGGAA ACTTTTGTAC TGCCACACTT CTTGAGTCAT GCCCTATTTC 
    ATATGTTTTT TTAAGACTAG CCTAAAAATA TATAGAGTTA ATAATTNTGN 
    AATATNCAAT GNATNAAATG GGACTANACA ACCACTTATA CTATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23221450 [Map]; Strand: w
      • AT1G62700.1 - [+] show detail - Arabidopsis NAC domain containing protein 26
        Distance: -3534; Region: intergenic
      • AT1G62710.1 - [+] show detail - beta vacuolar processing enzyme
        Distance: 2424; Region: intergenic
    Flanking Genome Sequence: 12-1232-1 - 3-prime edge 
    AGTAGATTAC TCAAAAAATT CAGCATAAAG ATAAATAACA TCGAGACATA 
    AATGGTCGTT TGTGGCCAAT TATTAAAAGA AATTTAGATC AAAATATATA 
    AGCTCCAATT CATGTATACA ATACACAGTA AACAATTTTT GCGCCAGAGG 
    CAAGGTGCGA AAAAAATAAT ACAATTTTTT CTTTAACAAA AAAAAGTGAC 
    ACTTTTTAGG ATC

AT1G62700.1

Model type
Protein coding
Short Description
Arabidopsis NAC domain containing protein 26
Curator Summary
Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
Computational Description
Arabidopsis NAC domain containing protein 26 (ANAC026); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC 007 (TAIR:AT1G12260.1); Has 3282 Blast hits to 3264 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 6; Plants - 3017; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62710.1

Model type
Protein coding
Short Description
beta vacuolar processing enzyme
Curator Summary
Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.
Computational Description
beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Link
InterPro Scan - TAIR