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12-1278-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13373820 [Map]; Strand: w
      • AT2G31360.1 - [+] show detail - 16:0delta9 desaturase 2
        Distance: -214; Region: promoter
    Flanking Genome Sequence: 12-1278-1 - 5-prime edge 
    CATGCAATAG TGAAAGTATA TTTTGTGTAA CCAGTAAAAA AAAAANAAAA 
    AGGTTAAATT TACAATGCCA ACGTAAANAG GAAAAGNGTC NCAGGGCTCN 
    AAATTAAGTT TTGACCTNAT TCTACCNGTT TTGATATACA TGCCTTTATG 
    GATGTNCCGN NATTNCAGGC AAAAATCACN TTCGGGTANC CTGGAAAACT 
    GTTNTNAAAA TTCCAAAGTT TTTTTCCTGT TTNTTTTAAA ATAAAAATNG 
    GAATTNCCCA CTGGCTTGTC CCCAANCNTA TNCNGTTTTT AGNCCTATNT 
    TATCAATAAT TTATGGNCAA TNTNTNTNCA ANCTAANGGA CCCAAGNGTC 
    AATNTNCNCC ANCTCCTAAN GTTAATACAA NACATTTNTT TNTTTTNCAA 
    TTTNTNCAAA AAATAAATCC AAATTTTTNT TTTTTTNTAN CATCAATTCA 
    ATTAATTAAT TTTNTTTNTT TAATAAAAAT AAATCAAATA GTCCCNTTAA 
    TAGTNGNCCA AAAAANGGAA TAGTNTNTAA ATTNGACTNT CCANCNCNTA 
    AAAAAAATGG GATTTTAACN CCTTTCCTTT TANTNTGCAA AAANAAAAAA 
    AAAAATAACC NN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13373704 [Map]; Strand: w
      • AT2G31360.1 - [+] show detail - 16:0delta9 desaturase 2
        Distance: -98; Region: promoter
    Flanking Genome Sequence: 12-1278-1 - 3-prime edge 
    ATTGCATGTA GTAGATACAC CTCAACCCTT ACGTGCCCAT CCGCAACAAC 
    AAATATCATG ATATTTATTA TTTACTGATT CCTTATGATA CTTTGTTGCA 
    GTAAATTAAA ATCACTATAA ATTAGAAGAG AAGCATCACT TTTATTCTTC 
    TCCATTAACA AAAAAGAGAG AGAGAACCTA AAAAGAAGAG AAGAGAAAGA 
    GAGATCCGAA ATGTCGGTGA CATCAACGGT GGAGGAGAAC CACCAGAAAA 
    ATCCATCAAC GCCGGCGGCG GTGGAGGAGG AGAAGAAGAA GAGGAGATGG 
    GTGTTTTGGG ATAGAAGGTG GAGGAGATTA GATTATGTGA AATTCTCAGC 
    TTCTTTCACT GTTCATTCTC TTGCTCTCTT GGCTCCGTTT TATTTCACTT 
    GGTCGGCTCT TTGGGTTACG TTTTTGTTTT ACACCATCGG TGGTCTTGGT 
    ATCACCGTCT CTTATCATCG CAACTTGGCT CACCGGAGTT TCAAAGTCCC 
    TAAATGGCTT GAGTATCTCT TAGCCTATTG TGCCCTTCTC GCTATTCAGG 
    TTCATAACCC TTTTTTATTT TATTTTTAAA GTCTATTTAA TTTTATAGAT 
    C

AT2G31360.1

Model type
Protein coding
Short Description
16:0delta9 desaturase 2
Curator Summary
homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression up-regulated by cold temperature.
Computational Description
16:0delta9 desaturase 2 (DS2); FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; INVOLVED IN: oxidation reduction, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: delta 9 desaturase 1 (TAIR:AT1G06080.1); Has 3454 Blast hits to 3454 proteins in 832 species: Archae - 0; Bacteria - 1553; Metazoa - 797; Fungi - 236; Plants - 106; Viruses - 4; Other Eukaryotes - 758 (source: NCBI BLink).
Link
InterPro Scan - TAIR