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12-1284-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23496072 [Map]; Strand: c
      • AT1G63350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-1284-1 - 5-prime edge 
    TTCATTGTGC GTGCAAGTGT GGGTTACGTG AAAGTCTAAA GGTTGAGAAT 
    TGGAACATCG TGAGAAGGAT GTCATTGATG AAGAATAATA TTATTCATCT 
    TGATGGCCGT CTTGATTGTA TGGAACTCAC AACTTTGCTA CTACAAAGCA 
    CACATTTGGA AAAGATCTCG AGTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23496188 [Map]; Strand: c
      • AT1G63350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-1284-1 - 3-prime edge 
    ACAATGAACG CCTCATTTTG TTTTCCCAAA TCAGATGCGA TCCATAAAGC 
    CATTTCACGA ACAACATCAT GCAGACAAAC AATATTTGCT CCATCCAATT 
    CAACCTCTTC CATCAACAAT GATGCACGAA CAAGACTACC AATTATCTCA 
    TAACCTTGGT TCTCAGCCTT ATCAATACCT TCACTTCCAT CTATAATTTC 
    CTCGCATATC CAGTACTCTA TCAAATTCTC CTTCCTTATT TTAGCATCTT 
    CTGGAAACAA AGCGCAATAT AGCAAACATA TTTTGACATC CTCCCCTTTG 
    AGACTATCAT AGCTATACTT TAAAAGCGGA AGGATCTTAT CGTCCATGGC 
    AGAAAACTTT GCAGCATATG AATTTAAAAC ATATATCGCA TAACGCCATT 
    CTTGTACCGT CCTCTTGCAT GACATGGTCT CACTTACCAC ATTGAGCGCC 
    AATGGTAAAC CACGACATTT TTTAGCAACT ACTCTAGCAA GTTCACGGAT 
    CTCTGGGTCG CTTCCTAGTG TTATTTGTCC AACCTTTTTT TGGAATAAAT 
    CATATGCGTC ATTGTCCGCC AGGCATTGGA CTTCCATTGG TTTTTCAACC 
    CCCATGCTTG TGCATACATC TAAGGACCGA GTGGTGAATA CCACTTTACA 
    TTTGTTTTTA TTGTNGGAAG GGGACTCCGA TCTCAACTAA ATTAACC

AT1G63350.1

Model type
Protein coding
Short Description
Disease resistance protein (CC-NBS-LRR class) family
Computational Description
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 18724 Blast hits to 16763 proteins in 698 species: Archae - 14; Bacteria - 926; Metazoa - 3029; Fungi - 209; Plants - 14107; Viruses - 4; Other Eukaryotes - 435 (source: NCBI BLink).
Link
InterPro Scan - TAIR