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12-1287-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23584972 [Map]; Strand: w
      • AT1G63610.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron3 (CDS)
      • AT1G63610.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-1287-1 - 5-prime edge 
    TGTGCAAGGT TCTCAGCAAC CTAAAGCAAT ATATAATGCT CAATTCAACA 
    AATAAATCCA AGTAACAAAC ACAGTACACA ACTTGTTGAA AACGTATCGC 
    TTACATAAAG CACTCACAGA GGTGACAGTA ACNGGCGAAA AACTGCGGTG 
    GCAGCGTTCC AATCATATTC GTCACAGTTT GTCTCATTGC TTCAACCACC 
    TAAGAAACAA GATAGAATCA ATCATAAGCT CTAACTCTAA ATGGTTCTTT 
    TGAGAAAATG AAGCAGAGTA AAGTTACATG TTTAGGGGCA CGTTTAACGA 
    ACATCTCCAT GAACTCTGGC TTCACATTCT GAACATACTC CAGTAGAATA 
    TCCCTTCTGC TTTTGGGCTG CTGCTTAAAA CCAGTGATCG ATTGTGATTA 
    GGGCTAATAT CAATTTCGAA TGCTGAACCA ATGGAATTTC AAGCTCAAAT 
    GCAAATTTAC CCGAGTGCCA TTGGGAGGCG TGGAGGAATC TGCAGAGGAA 
    TCAGAAGAAN AACCATAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23584856 [Map]; Strand: w
      • AT1G63610.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon4 (CDS)
      • AT1G63610.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 12-1287-1 - 3-prime edge 
    CTTGCACAGC TGATGATGAG CGTGTTGATG ACTGGATATA TGTTTAGAAA 
    CGCTCAATAT CGTCTTGAAT TGCAACAAAG TTTGGAGCAG GTTGCTCTTC 
    CTGAACCACG TGATCAAAAG GTGATCATTT TCAGTTTTAT AACNTTCTGT 
    TTTTTGCTTG GCCTGTAAAC GTGTACATGC CGATGACTTC TGCTTCTTCT 
    TTGCTTCCCG CTGATAAGCC TTGTGTTAAG ATACTGTAGG AGCATTGTAA 
    TTACCCCATG TAGCTGCGTT GATAGCTCAG CAACTATAGG TTAGTCAGTT 
    AGCTAGAGCG CAGTATAGTT TTGGCAGAAC GAGTTGGGAT ATTCTGGATT 
    GGTCTCGTAT ATTGGTTTGG GTCGTGGTTG AGAGTTAGAC TTCTCCTGAT 
    TATCAATCAT CTTTTGTGTT ATAGTTCTTT GGTTAATTGA ATATATAAGG 
    GGTTTACCGG TTTGAAACCT ATTAGACTCT CTTTCTCTCT CTCTTTGTAG 
    ATATGCGTGT GTTTGATATA TCAGGCTATA TGTGACACTG GTTTTCTATT 
    TCTGATTAAG CCAGGGGGGT GATGAAGACT ATGCACCAGG AACTCAAAAG 
    AATGTTTCTG GGGAAGTGAT CAGGTGGAAT AACGTATCTG GCCCTGANAA 
    AATTGATGCA AAAANTNTAT NAGCTTCTGN AAGCANAAAT CGAANAA

AT1G63610.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G63610.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR