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12-1307-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1256990 [Map]; Strand: w
      • AT4G02810.1 - [+] show detail - Protein of unknown function (DUF3049)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-1307-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCT 
    CCGAGATGGA GGATTCCGGA GCGATTCTAT GTCAGATCTC CATTTTCAAG 
    GACATGCTTG ATCAGGTTTT ACTCTTTTTC CTCTTCTTCT TCTTCTTCTT 
    CTTCTTCTTC TTCTTCTTCT TCTTCTTCTT CTTCTTCTTC TTCTTCTTCA 
    NNNGTGGTNG TANNTCNTCN TCNNCAGNNT AANAGNAGCG NTNAANNNAN 
    GAANNAGGNN NANNANNAAA NNGNANCNAN CNTGGNGGCG ACNCAANANA 
    NNNAATCANN GANAGCNGCN GNTNCNNANA ANNNNTCTNC NCTGNCTATN 
    AANAANGCTN ANNCTACAAC ATCGNTNNNT GCTTATNACA NCAACANCAG 
    CNGNATNANC NCCGNANNAG GNGNNNNAAT NNNNAGNAGG ANNNGAANAA 
    TANCNACANT NATNATGATG ANCACNATGT ATNANCTCNN CAGCAGCTGA 
    ANCAAAAAAC NTNCTGCAGC AGGAGGAGGA TNANAGNTGC TGCTGAAGAA 
    AGCANCACAN NCNGNTAATT ANGATGNCNG CCNAAGAAGC NGACAACAAC 
    AACANCGGCG GNNGGNTGNT GATNGNTNNT AATGNAGAAA CTNCTNANCN 
    ATNATNNAGC AACNNCACCG NGGNGNGGGG GGNATGAANA NNNNNGNNNN 
    NCNNCAAAAA AAGANNAAAA A

AT4G02810.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3049)
Computational Description
Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G03170.1); Has 61763 Blast hits to 21586 proteins in 896 species: Archae - 112; Bacteria - 2155; Metazoa - 26171; Fungi - 6892; Plants - 3461; Viruses - 1647; Other Eukaryotes - 21325 (source: NCBI BLink).
Link
InterPro Scan - TAIR