1. Home
  2. Mutant Lines
  3. 12-1310-1

12-1310-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 3617947 [Map]; Strand: c
      • AT2G08986.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -111; Region: promoter
    2. Chromosome: 2; Position: 3627485 [Map]; Strand: w
      • AT2G08986.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 1025; Region: intergenic
      • AT2G09187.1 - [+] show detail - transposable element gene
        Distance: 12118; Region: intergenic
    Flanking Genome Sequence: 12-1310-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGAATATGAC TTGATGTCAT GTGTATGATT GAGTATAAGA ACTTAAACCG 
    CAACCCGATC TTAAAAGCCT AAGTAGTGTA TCCTTGTGAG AAGACACAAA 
    GCCAACGACC TCATATGGAC TTTGGCTACA CCATGAAAGC T

AT2G08986.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40104.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G09187.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 2.3e-226 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR