1. Home
  2. Mutant Lines
  3. 12-1312-1

12-1312-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23497073 [Map]; Strand: c
      • AT1G63350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-1312-1 - 5-prime edge 
    CATGGAATCA TCTAATGGAA GATGGAGTTG GTATTATGGG TTTGTATGGT 
    ATGGGAGGTG TAGGGAAGAC GACTCTTCTC ACCCAGATTA ACAATAAGTT 
    CAGTGAGAAT ATGTGTGGAT TTGACAGCGT GATTTGGGTT GTGGTGTCTA 
    AAGAGGTGAA TGTAGAGAAT ATTCTAGATG AAATCGCTCA GAAAGTTCAT 
    ATTAGTGGAG AGAAGTGGGA CACAAAATAT AAATACCAAA AGGGCGTTTA 
    TTTATACAAT TTCTTAAGGA AAATGAGATT TGTATTGTTT TTGGATGACA 
    TATGGGAGAA GGTTAATTTA GTTGAGATCG GAGTCCCCTT TCCAACAATA 
    AAAAACAAAT GTAAAGTGGT ATTCACCACT CGGTCCTTAG ATGTATGCAC 
    AAGCATGGGG GTTGAAAAAC CAATGGAAGT CCAATGCCTG GCGGACAATG 
    ACGCATATGA TTTATTCCAA AAAAAGGTTG GACAAATAAC ACTAGGAAGC 
    GACCCAGAGA TCCGTGAACT TGCTAGAGTA GTTGCTAAAA AATGTCGTGG 
    TTTACCATTG GCGCTCAATG TGGTAAGTGA GACCATGTCA TGCAGAGGAC 
    GGTACAAGAA TGGCGTTATG CGATATATGT TTTAAATTCA TATGCTGCAA 
    AGTTTTTCTG CCATGGACAA TAANATCCTT CCGCTTTTAA N

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23497186 [Map]; Strand: c
      • AT1G63350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-1312-1 - 3-prime edge 
    ATATTTCCAT GCGTTATCAA GCATTGTTTC TTGACCAACA ATTGTCGGCT 
    GAAGTTGTTG TTCCTCCACC TCAGATGTTA AAGCT

AT1G63350.1

Model type
Protein coding
Short Description
Disease resistance protein (CC-NBS-LRR class) family
Computational Description
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 18724 Blast hits to 16763 proteins in 698 species: Archae - 14; Bacteria - 926; Metazoa - 3029; Fungi - 209; Plants - 14107; Viruses - 4; Other Eukaryotes - 435 (source: NCBI BLink).
Link
InterPro Scan - TAIR